BQ622993

Overview
NameBQ622993
Unique NameBQ622993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.622e-23
Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +PV+GLG  V +  E   + +V  A++ GYR  DTA+ YG E A+G A++ +   G+   R+++++TTKL + D        A + SL  L +DYVDLYLIHWP                      Y   W  + + ++ G+ + IGV NF+++ +  ++  S   P++NQ+E++P   Q +LRE      I+  A+ PLG
Sbjct:   22 IPVLGLG--VGELSEAEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGK----------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLG 199          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.622e-23
Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +PV+GLG  V +  E   + +V  A++ GYR  DTA+ YG E A+G A++ +   G+   R+++++TTKL + D        A + SL  L +DYVDLYLIHWP                      Y   W  + + ++ G+ + IGV NF+++ +  ++  S   P++NQ+E++P   Q +LRE      I+  A+ PLG
Sbjct:   22 IPVLGLG--VGELSEAEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGK----------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLG 199          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.767e-23
Identity = 71/205 (34.63%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLT-TRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQ-MDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIP--PSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            ++P I LGT    + +      V E +K GYRHFDTA  YG E+ +G+ I + L        R+++F TTKLW +         A+++ L  +  + Y+DL LIH P+      +L++               W AM+E    GL K IGVSN+  K I+ LL +  +   P VNQ+E++P   +++L ++CKSK ++V AF+PL
Sbjct:   13 KIPSIALGTYDIPRSQTAE--IVYEGVKCGYRHFDTAVLYGNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNEVSGLQYIDLLLIHSPLEGSKL-RLET---------------WRAMQEAVDEGLVKSIGVSNYGKKHIDELLNWPELKHKPVVNQIEISPWIMRQELADYCKSKGLVVEAFAPL 199          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.613e-23
Identity = 67/201 (33.33%), Postives = 108/201 (53.73%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +PV+G+G  V +  ++  + +V  A++ GYR  DTA+ YG E A+G AI  +   G+   R ++++TTKL   D        A + SL  L +DYVDLYLIHWP     S+ + S               W  + + +  G+ + IGV NF ++ +E +++ +   P+VNQ+E++P   Q  LRE     +I+  A+ PLG
Sbjct:   22 LPVVGIG--VGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GI--PRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWP-GGDTSKYVDS---------------WGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLG 199          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 3.613e-23
Identity = 69/204 (33.82%), Postives = 106/204 (51.96%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAA 612
            +MP +GLG      +E     A+  AI  GYR  DTA  Y  E  +GE I  +        R ++F+TTKL+  D   +  + A  +SL  L +DYVDLYL+HWP +   +  +QS               W+A E+    G  + IGV NF   +++ L+A S + P+VNQ+E++P + Q+ L    ++  I+  A+SP+G A
Sbjct:   15 KMPALGLGVFAASAEETAS--AIASAISSGYRLIDTARSYNNEAQVGEGIRNSG-----VDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWP-TKDWNATIQS---------------WKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIELHPYFAQKPLLAKNRALGIVTEAWSPIGGA 195          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y4483_MYCA1 (Uncharacterized oxidoreductase MAV_4483 OS=Mycobacterium avium (strain 104) GN=MAV_4483 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 71/202 (35.15%), Postives = 108/202 (53.47%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +MPV+GLG A  K  +   + +V+ A++ G R  DTA+ YG E A+G AI  +   G+   R++LF+TTKL  +         + K+SL  L +DY+DLYLIHWP             PK       ++G+ EA E     G  + IGVSNF+   +  ++  +   P+VNQVE++P   Q +LR+      +   ++SPLG
Sbjct:   24 KMPVLGLGVA--KLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GI--PREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWPA------------PKLGKYVESFEGMIEARER----GHVRSIGVSNFTEDLLATVIEETDEVPAVNQVELHPRLNQAELRQVHAQHDVTTQSYSPLG 202          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y3816_MYCA1 (Uncharacterized oxidoreductase MAV_3816 OS=Mycobacterium avium (strain 104) GN=MAV_3816 PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.373e-22
Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+GLG A    DE   + AV  A+++G R  DTA+ YG E A+G AI  +   G+   R +LF+TTKL  +D      + A + SL  L +DYVDLYLIHWP  A  +                Y   +  M + +  G  + IGVSNF+ + +  ++  + + P+VNQ+E++P   Q  LR+     +++  +++PL
Sbjct:   23 MPVLGLGVAELSDDET--ERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPAPALGT----------------YVNSFGGMIQSRGNGHARSIGVSNFTEEYLTTVIDLTFVTPAVNQIELHPLLNQEALRKTNAEHNVVTQSYTPL 199          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y3007_MYCPA (Uncharacterized oxidoreductase MAP_3007 OS=Mycobacterium paratuberculosis GN=MAP_3007 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.373e-22
Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+GLG A    DE   + AV  A+++G R  DTA+ YG E A+G AI  +   G+   R +LF+TTKL  +D      + A + SL  L +DYVDLYLIHWP  A  +                Y   +  M + +  G  + IGVSNF+ + +  ++  + + P+VNQ+E++P   Q  LR+     +++  +++PL
Sbjct:   20 MPVLGLGVAELSDDET--ERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPAPALGT----------------YVNSFGGMIQSRGNGHARSIGVSNFTEEYLTTVIDLTFVTPAVNQIELHPLLNQEALRKTNAEHNVVTQSYTPL 196          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.373e-22
Identity = 69/200 (34.50%), Postives = 106/200 (53.00%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            MPV+G+G A    DE   + AV  A+++G R  DTA+ YG E A+G AI  +   G+   R +LF+TTK+   D        A K SL  L +DYVDLYLIHWP  A                   Y   +  + + +  G T+ IGVSNF+ + +  ++  + + P+VNQVE++P   Q +LR+     +++  +++PL
Sbjct:   20 MPVLGMGVAGLSDDET--ERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAAGK----------------YVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRKANAQHNVVTQSYTPL 196          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.793e-22
Identity = 72/202 (35.64%), Postives = 101/202 (50.00%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIK-LGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPL 603
            EMP+IGLGT            AV+ +IK  GYR  DTA  YG E+ LG A+           R+++F++TKLW  D   D V  A + S   LQ DY+D+Y+IH P    P   +     KE          W  ME        + IGVSN+S + ++ LL F++I P  NQVE++P + Q  L+ +C    I+   + PL
Sbjct:   12 EMPLIGLGTT---HSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNCS-----VPREEMFLSTKLWPVDCG-DEVYNAFQTSCEKLQTDYLDMYMIHMP--QLPDWIVNQKETKEK--------TWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCPL 194          
The following BLAST results are available for this feature:
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
Y1984_MYCSK1.622e-2332.84Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS1.622e-2332.84Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
YJ66_YEAST2.767e-2334.63Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]
Y2407_MYCS23.613e-2333.33Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
MORA_PSEPU3.613e-2333.82Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
Y4483_MYCA11.051e-2235.15Uncharacterized oxidoreductase MAV_4483 OS=Mycobac... [more]
Y3816_MYCA11.373e-2234.50Uncharacterized oxidoreductase MAV_3816 OS=Mycobac... [more]
Y3007_MYCPA1.373e-2234.50Uncharacterized oxidoreductase MAP_3007 OS=Mycobac... [more]
Y1744_MYCMM1.373e-2234.50Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
YOF5_CAEEL1.793e-2235.64Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00084 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00084 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622993 ID=BQ622993; Name=BQ622993; organism=Citrus sinensis; type=EST; length=638bp
GAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAAGAAGGATGAAAA
TGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCGGTTACAGACACT
TTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTTGGAGAAGCAATC
GATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCAAGACCTCTTCAT
TACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACCTCGTTGTCCCAG
CTTTGAAGAAGTCTCTTAGGACCCTTCAGATGGACTATGTTGACCTCTAT
CTCATTCACTGGCCCATCAGTGCAAAGCCAAGTGAGAAATTACAAAGCCT
TATACCCAAAGAAGATCTTGTACCATTGGACTACAAGGGTGTGTGGGAAG
CCATGGAAGAGTGCCAGAGGCTTGGCCTCACTAAGTTCATTGGTGTCAGC
AACTTCTCTTCCAAGAAGATTGAGGCTCTACTCGCCTTCTCTACCATCCC
TCCTTCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAGACAGC
TCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCTCTCCC
TTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGT
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