BQ622995

Overview
NameBQ622995
Unique NameBQ622995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 68/112 (60.71%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 338
            +VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  302 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 68/112 (60.71%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 338
            +VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  302 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 68/112 (60.71%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 338
            +VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  302 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 68/112 (60.71%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 338
            +VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  302 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 68/112 (60.71%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 338
            +VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  302 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 68/112 (60.71%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 338
            +VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  302 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.083e-37
Identity = 71/130 (54.62%), Postives = 99/130 (76.15%), Query Frame = 3
Query:    9 KDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPT 398
            K++K G V  ++K+DP + A +F +QVI+MNHPG I  GY PVLD HT+H+A KF  L++K + R+GK +E+ PKFLKNG++G+V+++PTKP+ VE FS Y  LGRF +RDM++TVAVGVI+ V  K  T
Sbjct:  303 KEIKAGHVCGDAKNDPPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHKKET 432          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.916e-37
Identity = 71/125 (56.80%), Postives = 99/125 (79.20%), Query Frame = 3
Query:    3 AVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKS 377
            +V+D+ RG V  ++K+DP  +  +  +QVI+MNHP  I  GY PV+DCHT+HIA KF ++++++D+R+GK L + P  +KNG + M +++P+KPM VETFSDYPPLGRFAVRDMRQTVAVG+IKS
Sbjct:  306 SVEDIHRGNVCGDAKNDPPCKTES-DAQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30
Identity = 61/125 (48.80%), Postives = 89/125 (71.20%), Query Frame = 3
Query:    9 KDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 383
            KD+KRG V  +  + P   A  FT+++I++ HP  + NGY PV+  HT+ +A + SELV+K+D R+G+E EK P+FLK GD  +VK  P KP+ VE ++++PPLGRFA+RDM +TV VG+I  V+
Sbjct:  305 KDIKRGDVVGHPNNPPT-VADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428          
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.088e-29
Identity = 60/127 (47.24%), Postives = 89/127 (70.08%), Query Frame = 3
Query:   12 DLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 386
            D+KRG VA ++ + P   R    F +Q+I++NHP  I  GY PVL  HT+ +AV+F +L+ K+D R+G  +E+ P+F+K GD+ +V + PTKPMV+E   + P LGRFA+RDM QTVA G++ S++K
Sbjct:  300 DIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426          
The following BLAST results are available for this feature:
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_HELGL2.461e-3860.71Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI2.461e-3860.71Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM2.461e-3860.71Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL2.461e-3860.71Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF2.461e-3860.71Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE2.461e-3860.71Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A2_EUPCR2.083e-3754.62Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_BLAHO7.916e-3756.80Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A_SULSO7.176e-3048.80Elongation factor 1-alpha OS=Sulfolobus solfataric... [more]
EF1A_THESM2.088e-2947.24Elongation factor 1-alpha OS=Thermococcus sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00086 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00086 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622995 ID=BQ622995; Name=BQ622995; organism=Citrus sinensis; type=EST; length=660bp
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACCTCACAGGTCATCATCATGAA
CCACCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCCGTCAAGTTTTCTGAGCTCGTGACGAAGATTGATAGG
CGATCAGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
CGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAAACCT
TCTCCGATTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTTGCTGTGGGTGTTATCAAGAGTGTTGAGAAGAAGGATCCCACAGG
TGCGAAGGTCACCAAGTCCGCAGCCAAGAAGAAATGAGAAATTTTTATGG
GTCTGTCTACAATAGTTAGGGTTTATTTTCTGTCTTTTTTTATTTTCTTG
TCTGTTTTTGTTTTGCATCAATGTTTCTGCAAACAGCCCTATTTGCTTCC
ACCAGTTTGCTGTTGAGCAATTGGGATGTTATCTTTCTGCTTAACTGGCT
GTGGGTGGGTGTTCGGATTTTTATATTCTGAATTTGGTTAATAGCACTAA
ATTGAGTTGT
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