BQ622995
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23 Identity = 54/126 (42.86%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 389 D+ RG VA + D+P A + + ++ HP I GYAPVL HT+H+ V+F EL K++ +G+ +E+ P+ L+ G+A +VK+ P KP+V+E F P LGRFA+RDM +TVA+G+ + V K Sbjct: 303 DVMRGDVAGHL-DNPPTVAEEIVALIHVIYHPSAITVGYAPVLHVHTAHVPVRFEELRGKVNPATGQVIEENPQALRPGEAAVVKLKPLKPVVIEPFDKIPQLGRFAIRDMGRTVAIGIARQVTPK 427
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23 Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 389 D++RG V + D P A FT Q++++ HP I GY PV CHT+ A + K+D +SG+ E+ P ++K GDA +V + PT+PM +E S+ P LGRFA+RDM T+A G+ SV +K Sbjct: 297 DVRRGDVCGPA-DKPPSVADEFTGQIVVLQHPSAITVGYTPVFHCHTAQTACTLMAINKKLDPKSGQVKEENPTYIKAGDAAIVTIKPTRPMCIEPVSEIPQLGRFAIRDMGMTIAAGMCMSVTQK 421
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23 Identity = 50/125 (40.00%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 15 LKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 389 ++RG V + P A F +QV+++ HP I GY PV CHT+ +A ++++ +D ++G E+ P F+K GDA +V + PT+P+V+E + P LGRFA+RDM QTVA GV+ + K Sbjct: 303 IRRGDVCGHVDKQPT-VAVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVACTLTQILATLDPKTGGVKEQNPPFIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITPK 426
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.920e-23 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 389 D++RG V + DDP A F +Q+++M HP I GY PV HT+ +A + KID SG+ E+ P F++NGDA +V + P KP+ +E S+ P LG FA+RDM QT+A G + V ++ Sbjct: 297 DIRRGDVCGPA-DDPPSVAETFQAQIVVMQHPSVITEGYTPVFHAHTAQVACTVESIDKKIDPSSGEVAEENPDFIQNGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLGVNER 421
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23 Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 389 D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + KID SG+ E+ P F+++GDA +V + P KP+ +E+ ++ P LG FA+RDM QTVA G + SV ++ Sbjct: 298 DIRRGDVCGPA-DDPPSVAETFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKIDPSSGEVAEENPDFIQSGDAAVVTVRPQKPLSIESSNEIPELGSFAIRDMGQTVAAGKVLSVNER 422
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 389 D++RG V S + P A F +QV++M HP I GY PV HT+ +A + K+D SG+ E++P F+K+GDA +V + P KP+ +E ++ P LG FAVRDM QT+A G + V+++ Sbjct: 297 DIRRGDVCGPSSNAPT-VAETFKAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDQKLDPASGEVAEEDPDFIKSGDAAVVTVRPQKPLSIEPSNEIPELGSFAVRDMGQTIAAGKVLEVDER 421
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 386 D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + V++ Sbjct: 297 DIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 12 DLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 386 D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + V++ Sbjct: 297 DIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15 Identity = 41/126 (32.54%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 9 KDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVE 383 +D+ GFV ++ K+ P + F +QV I+ + +G++ V+ HT+ V+ ++L+ K++R + ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G ++K +E Sbjct: 538 EDIAPGFVLTSPKN-PVKNVTRFVAQVAIVELKSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKIIE 662
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15 Identity = 41/121 (33.88%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 9 KDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 371 +DL+ G+V ++ K+ P + F +Q+ I+ + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + ++P+ ET+ DYP LGRF +RD T+A+G I Sbjct: 589 EDLQPGYVLTSPKN-PVKTVTKFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKI 708 The following BLAST results are available for this feature:
BLAST of BQ622995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622995 ID=BQ622995; Name=BQ622995; organism=Citrus sinensis; type=EST; length=660bpback to top |