BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58
Identity = 111/213 (52.11%), Postives = 151/213 (70.89%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG DGV+                GM+ DRGY+SP FVTNPEK+I EF N  +L+ D+KIS++K+++P+LE   Q   PL+IIAEDV GEALATLVVN+LRG L++AA+KAPGFG+RRKA+L+DIA++TG    + ++G+ +E      LGTA K+ I KD+TTI+      + + AR+ Q+K E++ T S YD EKL ER+AKLSGGV
Sbjct:  163 EAMDKVGKDGVITVEEAKGISDELDVVEGMQFDRGYLSPYFVTNPEKMIAEFNNPFILLYDKKISSLKEMLPILESVNQSGRPLVIIAEDVDGEALATLVVNRLRGSLHIAAVKAPGFGDRRKAMLEDIAVLTGGTVISEEMGMKLETAEFSCLGTASKIVIDKDNTTIVDGNGDNERVVARVNQIKAEISNTTSDYDREKLQERLAKLSGGV 375          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_RHILO (60 kDa chaperonin 1 OS=Rhizobium loti GN=groL1 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58
Identity = 115/212 (54.25%), Postives = 152/212 (71.70%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+DKVG DGV+                GM+ DRGY+SP FVTN +K+ VE E   VL+ ++K+  ++ ++P+LE   Q   PLLII+EDV GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIA++T  +  + DLG+ +EN ++E LG A++V I KD+TTII  A +K  IQAR+AQ+K ++ ET S YD EKL ER+AKLSGGV
Sbjct:  165 AMDKVGNDGVITVEEAKTAETELDVVEGMQFDRGYLSPYFVTNADKMRVELEEPYVLIHEKKLGNLQAMLPILEAVVQSGRPLLIISEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTAGQMISEDLGIKLENVTIEMLGRAKRVLIEKDTTTIIDGAGTKATIQARVAQIKGQIEETTSDYDKEKLQERLAKLSGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEPF (60 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 109/213 (51.17%), Postives = 157/213 (73.71%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV  P+ ++ E E A +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIA++TG    + ++GL +E+T++E LG+A++VT+ K++T I+  A +  +IQARIAQ++ ++AET S YD EKL ER+AKLSGGV
Sbjct:  164 EAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGALILLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGLSLESTTLEHLGSAKRVTLSKENTIIVDGAGNDGDIQARIAQIRAQVAETSSDYDREKLQERLAKLSGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 108/213 (50.70%), Postives = 157/213 (73.71%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV++PE++    ENA +L+ D+KIS +KD++P+LE+T +   PL+IIAED+ GEALATLVVNKLRG+LNV A+KAPGFG+RRKA+L+DIAI+TG +  + ++G  +ENT++E LG A+++ + KD+TTII    S+ +IQ R+ Q++ ++ +T S YD EKL ER+AKL GGV
Sbjct:  164 EAMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVSDPERMEATLENATILIYDKKISNMKDMLPVLEQTAKSGRPLMIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAILTGGKVISEEMGFKLENTTMEMLGRAKRIVVDKDNTTIIDGDGSEADIQGRVKQIRAQIEDTTSDYDREKLQERLAKLVGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 111/213 (52.11%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGYISP FVTNPEK+  + EN  +L+ ++K+S+++ ++PLLE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG +  + DLG+ +E  ++  LGTA+KV I K++TTI+  A   D+I+ R+ Q++ ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGSEGVITVEEAKHFQTELDVVEGMQFDRGYISPYFVTNPEKMTADLENPYILIHEKKLSSLQPMLPLLESVVQSGRPLLIIAEDVDGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLETVTLNMLGTAKKVHIDKENTTIVDGAGKADDIKGRVKQIRAQIEETSSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 110/212 (51.89%), Postives = 154/212 (72.64%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A++KVG +GV+                GM+ DRGY+SP FVTN EK++ + EN  +L+ ++K+S ++ ++P+LE   Q   PLLIIAEDV GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIAI+TG +  + DLG+ +EN +++ LGTA+KVTI K+ TT++  A  K +I+AR +Q++  + +T S YD EKL ER+AKL+GGV
Sbjct:  165 AMEKVGNEGVITVEEAKGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSGLQALLPVLEAVVQSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLENVTIDMLGTAKKVTITKEETTLVDGAGDKKDIEARCSQIRANIEDTSSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 106/213 (49.77%), Postives = 155/213 (72.77%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA++KVG +GV+                GM+ DRGY+SP FVT+PE++     +A +L+ ++KIS++KD++P+LE+  +   PLLIIAED+ GEALATLVVNK+RG+LNV A+KAPGFG+RRKA+L+DIA +TG    A DLG+ ++  +++ LG A+++T+ KD+TTI+  A  + EI+AR+ Q++ ++ ET S YD EKL ER+AKL GGV
Sbjct:  163 DAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTDPERMEAALNDALILINEKKISSMKDLLPILEQVARAGKPLLIIAEDIEGEALATLVVNKIRGVLNVCAVKAPGFGDRRKAMLEDIATLTGGRMIAEDLGIKLDTITLQDLGRAKRITVDKDNTTIVDGAGGQQEIEARVKQIRAQIEETSSDYDREKLQERLAKLVGGV 375          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_RHOP5 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL1 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 111/212 (52.36%), Postives = 155/212 (73.11%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+ KVG +GV+                GM+ DRGY+SP FVTN EK+ VEF++A VL+ ++K+S ++ ++PLLE   Q   PL+IIAEDV GEALATLVVN+LRG L VAA+KAPGFG+RRKA+++DIAI+TG +  + DLG+ +EN +++ LG A+KV I K++TTI+  A  K +I++R+ Q+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  165 AMQKVGNEGVITVEENKSLTTEVDIVEGMKFDRGYLSPYFVTNAEKMAVEFDDAYVLLHEKKVSGLQSMLPLLEAVVQAGKPLVIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILTGGQLISDDLGMKLENVTLKMLGRAKKVVIDKENTTIVGGAGKKADIESRVGQIKAQIEETSSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_KINRD (60 kDa chaperonin 1 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=groL1 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 114/213 (53.52%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA DKVG DGV+                GM+ D+GYISP FVT+ E+     E+A VLV   KIS ++D++PLLEK  +   PLLIIAEDV GEAL+TLVVNK+RG  N  A+KAPGFG+RRKA+LQDIA +TGA+  A ++GL ++   ++ LGTAR++T+ KD TTI+  A S ++I  R+AQ+K E+  TDS +D EKL ER+AKLSGGV
Sbjct:  162 DAFDKVGKDGVITVEESSTTALELDFTEGMQFDKGYISPYFVTDAERQEAVLEDAYVLVHQGKISTVQDLLPLLEKVLKAAKPLLIIAEDVDGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAILQDIATLTGAQVVAEEVGLKLDQIDLDALGTARRITVTKDDTTIVDGAGSSEDIAGRVAQIKAEVERTDSDWDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_HELHP (60 kDa chaperonin OS=Helicobacter hepaticus GN=groL PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.328e-57
Identity = 114/213 (53.52%), Postives = 152/213 (71.36%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S  FVTN +K+  + ENA VL+TD+KIS +K+I+PLLE T Q   PLLIIAED+ GEAL TLVVNKLRG+LNV+A+KAPGFG+RRKA+LQDIAI+TG +  + +LG  +E  ++  LG+A ++ I KD+TTI+       +++ RIAQ+K E+  T S YD EKL ER+AKLSGGV
Sbjct:  164 EAMEKVGKDGVITVEEAKGINDELSVVEGMQFDRGYLSAYFVTNTDKMTAQLENAYVLLTDKKISNMKEILPLLEATMQSGKPLLIIAEDIEGEALTTLVVNKLRGVLNVSAVKAPGFGDRRKAMLQDIAILTGGQVISEELGKTLEAATLADLGSAARIVIDKDNTTIVDGKGKTKDVKDRIAQIKTEIENTTSDYDREKLQERLAKLSGGV 376          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ARCB47.784e-5852.1160 kDa chaperonin OS=Arcobacter butzleri (strain R... [more]
CH601_RHILO7.784e-5854.2560 kDa chaperonin 1 OS=Rhizobium loti GN=groL1 PE=... [more]
CH60_PSEPF1.017e-5751.1760 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH60_GEOLS1.017e-5750.7060 kDa chaperonin OS=Geobacter lovleyi (strain ATC... [more]
CH60_ACEP31.017e-5752.1160 kDa chaperonin OS=Acetobacter pasteurianus (str... [more]
CH602_RHORT1.017e-5751.8960 kDa chaperonin 2 OS=Rhodospirillum rubrum (stra... [more]
CH602_MYXXD1.017e-5749.7760 kDa chaperonin 2 OS=Myxococcus xanthus (strain ... [more]
CH601_RHOP51.017e-5752.3660 kDa chaperonin 1 OS=Rhodopseudomonas palustris ... [more]
CH601_KINRD1.017e-5753.5260 kDa chaperonin 1 OS=Kineococcus radiotolerans (... [more]
CH60_HELHP1.328e-5753.5260 kDa chaperonin OS=Helicobacter hepaticus GN=gro... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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