BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_CYTH3 (60 kDa chaperonin OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=groL PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.328e-57
Identity = 111/212 (52.36%), Postives = 151/212 (71.23%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+DKVG DGV+                GM+ DRGY+SP FVTN +K+ VE +   +L+ D+K+S++K+++P+LE+  Q   PLLIIAEDV GEALATLVVNK+RG L +AA+KAPGFG+RRKA+L+DIAI+TG    + + G  +EN ++E LGTA K+ I KD+TT++  +  KD I AR+ Q+K ++  T S YD EKL ER+AKLSGGV
Sbjct:  164 AMDKVGKDGVITVEEAKGTETEVKTVEGMQFDRGYLSPYFVTNTDKMEVELDRPYILIYDKKVSSMKELLPILEQVVQSGRPLLIIAEDVDGEALATLVVNKIRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEESGYKLENATLEYLGTAEKINIDKDNTTVVNGSGLKDNIVARVNQIKSQMENTTSDYDREKLQERLAKLSGGV 375          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_CAUSK (60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.328e-57
Identity = 112/212 (52.83%), Postives = 154/212 (72.64%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+DKVG +GV+                GM+ DRGY+SP F+TN +K+ V+ E   +L+ ++K+S+++ ++P+LE   Q   PL+IIAEDV GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIAI+TGA+  + DLG+ +EN S++ LG A+KV+I KD TTI+     K  I+ARI Q+KK++ +T S YD EKL ER+AKL+GGV
Sbjct:  165 AMDKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNADKMEVQLEEPLILLFEKKLSSLQPLLPVLEAVVQSGRPLVIIAEDVEGEALATLVVNKLRGGLRVAAVKAPGFGDRRKAMLEDIAILTGAQVISEDLGIKLENVSLDMLGKAKKVSITKDDTTIVDGVGEKTAIEARIGQIKKQIEDTTSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_BRASB (60 kDa chaperonin 2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL2 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.328e-57
Identity = 111/212 (52.36%), Postives = 152/212 (71.70%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+ KVG DGV+                G++ DRGY+SP FVTN +KL+VEFE   +L+ + K+++++ ++P+LE   Q   PLL+IAEDV GEALATLVVNKLRG L VAA+KAPGFG+RRKA L+DIAI+TG +  + DLG+ +EN ++ QLG AR++ I K++TT++     K +I ARIAQ++ ++ ET S YD EKL ER+AKLSGGV
Sbjct:  165 AVKKVGNDGVITVEEAKSLETELDVVEGLQFDRGYLSPYFVTNSDKLLVEFEEPYILIHESKLTSLQPLLPVLEAVVQTGRPLLVIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAQLEDIAILTGGQTISQDLGIKLENVTLSQLGRARRIRIDKENTTVVGGTGKKKDIDARIAQIRAQIEETTSDYDREKLQERLAKLSGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.328e-57
Identity = 112/213 (52.58%), Postives = 155/213 (72.77%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTN EK+ VEFE+  +L+ ++K+S +++++P+LE   Q   PL+I+AEDV GEALATLVVNKLRG L VAA+KAPGFG+RRKA+LQDIAI+TG +  + DLG+ +EN ++  LG A+KV I K++TTI+     K +I+AR+AQ+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNAEKMRVEFEDPYILIHEKKLSNLQELLPVLEAVVQSGKPLVIVAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVNLSMLGRAKKVVIEKENTTIVDGNGEKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 112/213 (52.58%), Postives = 154/213 (72.30%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA++KVG DGV+                GM+ DRGY+S   VT+ +K+  + +N  +L+TD+KIS I++++PLL+   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+LQDIA +TGA     DLGL +++T+VEQLG+A KVT+ K++TTI+  A  KD+I  R+ Q+KK+++ET S +D EKL ER+AKLSGGV
Sbjct:  162 DAMEKVGNDGVITIEESKGIDTSLDVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILLTDKKISNIQEVLPLLQSIVQQGRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLQDIATLTGATVITDDLGLQLKDTTVEQLGSAGKVTVTKENTTIVEGAGDKDKIAERVEQIKKQISETTSDFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_DESDA (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 106/213 (49.77%), Postives = 155/213 (72.77%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM  DRGY+SP FVTNPEK++ E +N  +L T++KIS++KD++P+LE+  ++  PL+IIAEDV GEALATLVVNKLRG L V A+KAPGFG+RRKA+LQDIA++TG +  + D G  +EN ++ +LGTA+++ I K++TT++  A   ++I+AR+ Q++ ++ ++ S YD EKL ER+AKL GGV
Sbjct:  164 EAMAKVGKEGVITVEEAKGLETTMDVVEGMRFDRGYLSPYFVTNPEKMVCEMDNPYILCTEKKISSMKDMLPVLEQVAKVNRPLMIIAEDVEGEALATLVVNKLRGALQVVAVKAPGFGDRRKAMLQDIAVLTGGQVASDDTGSKLENMTLAELGTAKRIVIDKENTTVVDGAGKSEDIKARVKQIRAQIEDSTSDYDREKLQERLAKLVGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BRUO2 (60 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 110/213 (51.64%), Postives = 156/213 (73.24%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTNPEK++ + E+A +L+ ++K+S ++ ++P+LE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET   YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQALLPVLEAVVQTSKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTLDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BDEBA (60 kDa chaperonin OS=Bdellovibrio bacteriovorus GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 115/213 (53.99%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA+DKVG +GV+                GM+ DRGY+SP FVTN E++    ENA VLV D+KIS++KD+I +LE   +    LLIIAEDV GEALATLVVNKLRG L++AA+KAPGFG+RRKA+L+DIAI+TGA+  + D+GL +E  +V  LG A+++ + KD+TTII  A  K++I  R+ Q+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  163 DAMDKVGREGVITIEESKTAKTEVTVVEGMQFDRGYLSPYFVTNAERMEAVLENAYVLVYDKKISSMKDMIGILEGVAKQGRQLLIIAEDVEGEALATLVVNKLRGTLHIAAVKAPGFGDRRKAMLEDIAILTGAKVISEDVGLKLEAATVADLGVAKRIVVDKDNTTIIDGAGKKNDINGRVGQIKAQIEETSSDYDKEKLKERLAKLAGGV 375          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 110/213 (51.64%), Postives = 156/213 (73.24%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTNPEK++ + E+A +L+ ++K+S ++ ++P+LE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG    + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVDGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_SINMW (60 kDa chaperonin 1 OS=Sinorhizobium medicae (strain WSM419) GN=groL1 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 110/213 (51.64%), Postives = 156/213 (73.24%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTNPEK++ + E+A +L+ ++K+S ++ ++P+LE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG    + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGV 376          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CYTH31.328e-5752.3660 kDa chaperonin OS=Cytophaga hutchinsonii (strai... [more]
CH60_CAUSK1.328e-5752.8360 kDa chaperonin OS=Caulobacter sp. (strain K31) ... [more]
CH602_BRASB1.328e-5752.3660 kDa chaperonin 2 OS=Bradyrhizobium sp. (strain ... [more]
CH602_AZOC51.328e-5752.5860 kDa chaperonin 2 OS=Azorhizobium caulinodans (s... [more]
CH60_LACS11.734e-5752.5860 kDa chaperonin OS=Lactobacillus salivarius subs... [more]
CH60_DESDA1.734e-5749.7760 kDa chaperonin OS=Desulfovibrio desulfuricans (... [more]
CH60_BRUO21.734e-5751.6460 kDa chaperonin OS=Brucella ovis (strain ATCC 25... [more]
CH60_BDEBA1.734e-5753.9960 kDa chaperonin OS=Bdellovibrio bacteriovorus GN... [more]
CH605_SINMW1.734e-5751.6460 kDa chaperonin 5 OS=Sinorhizobium medicae (stra... [more]
CH601_SINMW1.734e-5751.6460 kDa chaperonin 1 OS=Sinorhizobium medicae (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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