BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_PROMS (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.052e-54
Identity = 103/213 (48.36%), Postives = 154/213 (72.30%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYISP F T+ E++    +   +L+TD+KI+ ++D++P+LE+  +   PL+IIAED+  EALATLVVN+LRG+LNVAA+KAPGFG+RRKA+L+D+A++T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGV
Sbjct:  163 NAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIALVQDLVPVLEQIAKTGKPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAE-GNEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.052e-54
Identity = 103/213 (48.36%), Postives = 154/213 (72.30%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYISP F T+ E++    +   +L+TD+KI+ ++D++P+LE+  +   PL+IIAED+  EALATLVVN+LRG+LNVAA+KAPGFG+RRKA+L+D+A++T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGV
Sbjct:  163 NAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIALVQDLVPVLEQIAKTGKPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAE-GNEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_PROM2 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.052e-54
Identity = 103/213 (48.36%), Postives = 154/213 (72.30%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYISP F T+ E++    +   +L+TD+KI+ ++D++P+LE+  +   PL+IIAED+  EALATLVVN+LRG+LNVAA+KAPGFG+RRKA+L+D+A++T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGV
Sbjct:  163 NAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIALVQDLVPVLEQIAKTGKPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAE-GNEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.052e-54
Identity = 103/213 (48.36%), Postives = 154/213 (72.30%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYISP F T+ E++    +   +L+TD+KI+ ++D++P+LE+  +   PL+IIAED+  EALATLVVN+LRG+LNVAA+KAPGFG+RRKA+L+D+A++T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGV
Sbjct:  163 NAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIALVQDLVPVLEQIAKTGKPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAE-GNEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_ANADF (60 kDa chaperonin 1 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.052e-54
Identity = 106/213 (49.77%), Postives = 152/213 (71.36%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY SP FVTNP+++    E+  +L+T++KISA+ D+IP+LE+  +   PLLI+AEDV GEALATLVVNKLRG L+V A+KAPGFG+RRK +L+DIA +TG    A +LG+ +E  +V+ LG A+++TI K++TTI+     +++I+ARI Q++ ++ ET S YD EKL ER+AKL GGV
Sbjct:  164 EAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYSSPYFVTNPDRMEAVLEDPFILITEKKISAMADLIPVLEQVARSGKPLLIVAEDVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKEMLKDIATLTGGNVVAEELGIKLEQLTVKDLGRAKRITIDKENTTIVDGEGKREDIEARIKQIRAQIEETTSDYDREKLQERLAKLVGGV 376
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.374e-54
Identity = 104/213 (48.83%), Postives = 151/213 (70.89%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+TNPEK++ E  +  +L+ ++K+S ++ I+P+LE   Q   PLLIIAED+ GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIAI+T  E  + DLG+ +EN ++  LG+A++V+I K++TTI+  A  +  I+ R+  ++ ++  T S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEAKGFDFELDVVEGMQFDRGYLSPYFITNPEKMVAELADPYILIYEKKLSNLQSILPILESVVQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGELISEDLGIKLENVTLNMLGSAKRVSITKENTTIVDGAGDQSTIKDRVEAIRSQIEATTSDYDREKLQERVAKLAGGV 376
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRTD (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.374e-54
Identity = 109/213 (51.17%), Postives = 148/213 (69.48%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +LVTD+KIS I+DI+PLLE+  +   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIA++TGA     DLGL +++ ++E LG A KVT+ KDST I+  A S + I  R+  +K +L  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMERVGNDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILVTDKKISNIQDILPLLEEVLKTSRPLLIIADDVAGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGATVITEDLGLELKDATMESLGQASKVTVDKDSTVIVEGAGSAEAIANRVNLIKSQLETTTSEFDREKLQERLAKLSGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRT2 (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.374e-54
Identity = 109/213 (51.17%), Postives = 148/213 (69.48%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +LVTD+KIS I+DI+PLLE+  +   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIA++TGA     DLGL +++ ++E LG A KVT+ KDST I+  A S + I  R+  +K +L  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMERVGNDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILVTDKKISNIQDILPLLEEVLKTSRPLLIIADDVAGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGATVITEDLGLELKDATMESLGQASKVTVDKDSTVIVEGAGSAEAIANRVNLIKSQLETTTSEFDREKLQERLAKLSGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRT1 (60 kDa chaperonin OS=Streptococcus thermophilus (strain CNRZ 1066) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.374e-54
Identity = 109/213 (51.17%), Postives = 148/213 (69.48%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +LVTD+KIS I+DI+PLLE+  +   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIA++TGA     DLGL +++ ++E LG A KVT+ KDST I+  A S + I  R+  +K +L  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMERVGNDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILVTDKKISNIQDILPLLEEVLKTSRPLLIIADDVAGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGATVITEDLGLELKDATMESLGQASKVTVDKDSTVIVEGAGSAEAIANRVNLIKSQLETTTSEFDREKLQERLAKLSGGV 374
[Close]
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEA6 (60 kDa chaperonin OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.374e-54
Identity = 104/213 (48.83%), Postives = 150/213 (70.42%), Query Frame = 3 
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ N E   VE ++  +L+ D+K+S I++++P LE   +   PLLIIAEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQD+A +TG    + ++GL +E  ++E LGTA++V I KD+TT++  A  ++ IQ R+AQ++ ++ E+ S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEEGQSLQNELEVVEGMQFDRGYLSPYFMNNQENGTVELDSPFILLVDKKVSNIRELLPTLEAVAKASKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDLATLTGGTVISEEIGLELEKVTLEDLGTAKRVVINKDNTTVVDGAGEEEAIQGRVAQIRAQIEESSSDYDKEKLQERLAKLAGGV 376
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_PROMS1.052e-5448.3660 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM91.052e-5448.3660 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM21.052e-5448.3660 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM01.052e-5448.3660 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH601_ANADF1.052e-5449.7760 kDa chaperonin 1 OS=Anaeromyxobacter sp. (strai... [more]
CH60_ZYMMO1.374e-5448.8360 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=... [more]
CH60_STRTD1.374e-5451.1760 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_STRT21.374e-5451.1760 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_STRT11.374e-5451.1760 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_PSEA61.374e-5448.8360 kDa chaperonin OS=Pseudoalteromonas atlantica (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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