BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEAE (60 kDa chaperonin OS=Pseudomonas aeruginosa GN=groL PE=1 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 105/213 (49.30%), Postives = 152/213 (71.36%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV  P+ +  E ++  +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++GL +E  ++E LG A++V I K++TTII  A  + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEAB (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 105/213 (49.30%), Postives = 152/213 (71.36%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV  P+ +  E ++  +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++GL +E  ++E LG A++V I K++TTII  A  + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEA8 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 105/213 (49.30%), Postives = 152/213 (71.36%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV  P+ +  E ++  +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++GL +E  ++E LG A++V I K++TTII  A  + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEA7 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 105/213 (49.30%), Postives = 152/213 (71.36%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV  P+ +  E ++  +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++GL +E  ++E LG A++V I K++TTII  A  + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PASMU (60 kDa chaperonin OS=Pasteurella multocida GN=groL PE=3 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 105/212 (49.53%), Postives = 149/212 (70.28%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+DKVG +GV+                GM+ DRGY+SP F+  PE   VE +N  +L+ D+K+S I++++P+LE   +   PLLIIAEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+T     + ++G+ +E  ++E LG A++V I KD+TTII     + +IQ R+AQ+++++ E+ S YD EKL ER+AKL+GGV
Sbjct:  165 AMDKVGKEGVITVEDGTGLEDELAVVEGMQFDRGYLSPYFINKPETATVELDNPFILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIQGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_HAEPS (60 kDa chaperonin OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 105/212 (49.53%), Postives = 151/212 (71.23%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A++KVG +GV+                GM+ DRGY+SP F+  PE   VE EN  +L+ D+KIS I++I+P+LE   +   PLLIIAED+ GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+T     + ++G+ +E  ++E+LG A++V I KD+TTII     + +I+AR+AQ+++++ ++ S YD EKL ER+AKL+GGV
Sbjct:  165 AMEKVGKEGVITVEDGTGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENPYILLVDKKISNIREILPVLEAVAKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATIEELGQAKRVVISKDNTTIIDGVGDEVQIKARVAQIRQQIEDSTSDYDKEKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_FUSNN (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. nucleatum GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 103/212 (48.58%), Postives = 148/212 (69.81%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A+ KVG  GV+                GM+ D+GY+SP  VT+ E++  E +N  +L+TD+KIS++K+++PLLE+T Q+  P+LI+A+D+ GEAL TLV+NKLRG LNV A+KAP FG+RRKA+L+DIAI+TG E  + + G+ +E  ++EQLG A+ V + KD T I+     + +I AR+  +K ++AET S YD EKL ER+AKLSGGV
Sbjct:  163 AMAKVGETGVITVEEAKSLETTLEIVEGMQFDKGYVSPYMVTDSERMTAELDNPLILLTDKKISSMKELLPLLEQTVQMSKPVLIVADDIEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAILEDIAILTGGEVISEEKGMKLEEATIEQLGKAKTVKVTKDLTVIVDGGGQQKDISARVNSIKAQIAETTSDYDKEKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BACST (60 kDa chaperonin OS=Bacillus stearothermophilus GN=groL PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 106/213 (49.77%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY+SP  +T+ EK+    EN  +L+TD+K+S+I++I+P+LE+  Q   PLLIIAEDV GEALATLVVNKLRG  N  A+KAPGFG+RRKA+L+DIAI+TG E  + +LG  +++ ++  LG A KV + K++TTI+  A     I+ARI Q++ +L ET S +D EKL ER+AKL+GGV
Sbjct:  162 EAMERVGNDGVITLEESKGFATELDVVEGMQFDRGYVSPYMITDTEKMEAVLENPYILITDKKVSSIQEILPILEQVVQQGRPLLIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRELKSATIASLGRASKVVVTKENTTIVEGAGDSKRIKARINQIRAQLEETTSEFDREKLQERLAKLAGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ANOFW (60 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 106/213 (49.77%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY+SP  +T+ +K+    EN  +L+TD+K+S+I++++P+LE+  Q   PLLIIAEDV GEALATLVVNKLRG     A+KAPGFG+RRKA+LQDIAI+TG E    +LG  +++T++  LG A KV + K+ TTI+  A   ++IQARI Q++ +L ET S +D EKL ER+AKL+GGV
Sbjct:  162 EAMERVGKDGVITLEESKGFTTELDVVEGMQFDRGYVSPYMITDSDKMEAVLENPYILITDKKVSSIQELLPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFTAVAVKAPGFGDRRKAMLQDIAILTGGEVITEELGRELKSTTIASLGRAAKVVVTKEHTTIVDGAGRAEDIQARINQIRAQLEETTSEFDREKLQERLAKLAGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ACISJ (60 kDa chaperonin OS=Acidovorax sp. (strain JS42) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 107/213 (50.23%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA+DKVG +GV+                GM+ DRGY+SP F+ NPEK     +N  VL+ D+KIS I+D++P LE+  +   PLLIIAEDV GEALATLVVN +RGIL V A+KAPGFG+RRKA+L+DIAI+TG +  A ++GL +E  ++  LG A+++ + K++TTII  A +  +I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 DAMDKVGKEGVITVEDGKSLENELEVVEGMQFDRGYLSPYFINNPEKQAAILDNPFVLLFDKKISNIRDLLPTLEQVAKASRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRIQIEEATSDYDREKLQERVAKLAGGV 376          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_PSEAE1.794e-5449.3060 kDa chaperonin OS=Pseudomonas aeruginosa GN=gro... [more]
CH60_PSEAB1.794e-5449.3060 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH60_PSEA81.794e-5449.3060 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH60_PSEA71.794e-5449.3060 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH60_PASMU1.794e-5449.5360 kDa chaperonin OS=Pasteurella multocida GN=groL... [more]
CH60_HAEPS1.794e-5449.5360 kDa chaperonin OS=Haemophilus parasuis serovar ... [more]
CH60_FUSNN1.794e-5448.5860 kDa chaperonin OS=Fusobacterium nucleatum subsp... [more]
CH60_BACST1.794e-5449.7760 kDa chaperonin OS=Bacillus stearothermophilus G... [more]
CH60_ANOFW1.794e-5449.7760 kDa chaperonin OS=Anoxybacillus flavithermus (s... [more]
CH60_ACISJ1.794e-5450.2360 kDa chaperonin OS=Acidovorax sp. (strain JS42) ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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