BQ623019
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 280.796 bits (717), Expect = 2.421e-80 Identity = 148/179 (82.68%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 K+ ETDSVYDSEKLAERIAKL+GGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA LVHLS +PAIK+KLEDADERLGADIVQKALVAPA+LIA NA SEW GYNAMTD YEN+L+AGVIDPAKVTRCALQNAASVAGMVLTTQAIVV+KPK Sbjct: 354 KKELSETDSVYDSEKLAERIAKLAGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPK 532 HSP 2 Score: 30.4166 bits (67), Expect = 2.421e-80 Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 2 ADAASKDEIQARIAQPEK 55 ADAASKDE+QARI+Q +K Sbjct: 338 ADAASKDELQARISQLKK 355 HSP 3 Score: 29.6462 bits (65), Expect = 2.421e-80 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 584 PKPKTPVAAPTQGLM 628 PKPK P AAP QGLM Sbjct: 531 PKPKAPTAAPPQGLM 545
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 283.108 bits (723), Expect = 5.778e-79 Identity = 147/179 (82.12%), Postives = 157/179 (87.71%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 K+ ETDS+YDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS +VPAIK+KLEDADERLGADIVQKALVAPA+LIA NA + EW GYNAMTD YEN++++GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK Sbjct: 395 KKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGEWEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 573 HSP 2 Score: 30.0314 bits (66), Expect = 5.778e-79 Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 2 ADAASKDEIQARIAQPEK 55 ADAASKDE+Q+R+AQ +K Sbjct: 379 ADAASKDELQSRVAQLKK 396 HSP 3 Score: 23.0978 bits (48), Expect = 5.778e-79 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 2 Query: 584 PKPKTPVAAPTQGL 625 PKPK VAA QGL Sbjct: 572 PKPKAAVAAAPQGL 585
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 1.797e-77 Identity = 144/179 (80.45%), Postives = 154/179 (86.03%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 K+ ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS +PAIK+ EDADERLGADIVQKAL++PA+LIA NA S+W GYNAMTD YEN+ +AGVIDPAKVTRCALQNAASVAGMVLTTQAIVV+KPK Sbjct: 394 KKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSDWENGYNAMTDTYENLFEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPK 572 HSP 2 Score: 31.5722 bits (70), Expect = 1.797e-77 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 2 ADAASKDEIQARIAQPEK 55 ADAASKDE+QARIAQ +K Sbjct: 378 ADAASKDELQARIAQLKK 395 HSP 3 Score: 25.409 bits (54), Expect = 1.797e-77 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 584 PKPKTPVAAPTQGLM 628 PKPK P AA +GLM Sbjct: 571 PKPKAPAAAAPEGLM 585
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 6.134e-77 Identity = 142/179 (79.33%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 K+ ETDS+YDSEKLAERIAKLSGGVAVIKVGA TETELEDR+LRIEDAKNATFAAIEEGIVPGGGAA VHLS +VPAIK+ +ED DERLGADI+QKAL APASLIA+NA +SEW GYNAMTDKYEN++++GVIDPAKVTRCALQNAASV+GMVLTTQAIVVEKPK Sbjct: 350 KKELSETDSIYDSEKLAERIAKLSGGVAVIKVGATTETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAPASLIANNAGVEGEVVIEKIKESEWEMGYNAMTDKYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQAIVVEKPK 528 HSP 2 Score: 31.9574 bits (71), Expect = 6.134e-77 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 2 ADAASKDEIQARIAQPEK 55 ADAASKDEIQAR+AQ +K Sbjct: 334 ADAASKDEIQARVAQLKK 351
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 8.470e-74 Identity = 145/179 (81.01%), Postives = 151/179 (84.36%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 K+ ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA LVHLS +PAIK+ EDAD RLGADIVQKALVA SLIA NA SEW GYNAMTD YEN+L+AGVIDPAKVTRCALQNAASVAGMVLTTQAIVV+KPK Sbjct: 392 KKESFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKALVA-QSLIAQNAGIEGEVVVEKIMFSEWELGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPK 569 HSP 2 Score: 27.335 bits (59), Expect = 8.470e-74 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 2 ADAASKDEIQARIAQPEK 55 ADAASK E+QARI+Q +K Sbjct: 376 ADAASKAELQARISQLKK 393 HSP 3 Score: 25.409 bits (54), Expect = 8.470e-74 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 584 PKPKTPVAAPTQGLM 628 PKPK P AA +GLM Sbjct: 568 PKPKAPAAAAPEGLM 582
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.543e-66 Identity = 128/159 (80.50%), Postives = 134/159 (84.28%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQN 528 KR ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAI + +DADERLGADI+QKALVAPASLIA NA EW GYNAMTDKYEN+++AGVIDPAKVTRCALQN Sbjct: 337 KRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAINGEDKDADERLGADILQKALVAPASLIAQNAGIEGEVVVEKVKAREWEIGYNAMTDKYENLVEAGVIDPAKVTRCALQN 495 HSP 2 Score: 30.4166 bits (67), Expect = 5.543e-66 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 2 ADAASKDEIQARIAQ 46 ADAASKDE+QARIAQ Sbjct: 321 ADAASKDELQARIAQ 335
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.012e-60 Identity = 123/179 (68.72%), Postives = 141/179 (78.77%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 K+ ETDSVYD+EKL+ERIAKLSGGVAVIKVGAATE ELEDRKLRIEDAKNATFAA+EEGIVPGGGAAL+HLS+ VPA K+ L DA+E+LGADIV K+L AP LIA NA + GYNAM DK EN+L AGVIDPAKVTR L N+ S+AG++LTTQA++VEK K Sbjct: 383 KKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEAELEDRKLRIEDAKNATFAAVEEGIVPGGGAALLHLSELVPAFKETLTDAEEKLGADIVMKSLRAPCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKVENLLDAGVIDPAKVTRNGLLNSVSIAGIMLTTQAVMVEKHK 561
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 1.848e-54 Identity = 113/179 (63.13%), Postives = 138/179 (77.09%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 +R ETDS YDSEKL ERIAKL+GG+AVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L++L+ V IK K D +E++GADIV++AL AP IA NA DS++ TGYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AIVVEKP+ Sbjct: 348 RRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIK-KNFDEEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKDSDFNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPE 525
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.376e-54 Identity = 112/183 (61.20%), Postives = 140/183 (76.50%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600 +R ETDS YDSEKL ERIAKL+GG+AVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L++L+ V IK K D +E++GADIV++AL AP IA NA DS++ GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AIVVEKP+ +++ Sbjct: 348 RRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIK-KNFDEEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKDSDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKSA 529
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.376e-54 Identity = 110/179 (61.45%), Postives = 138/179 (77.09%), Query Frame = 1 Query: 52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588 +R ETDS YD EKL ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L+HL+ + ++K +L+D +E++GAD+V AL AP + IA NA D++++ GYNAMTD YE+M+ AGV+DPAKV R LQNA S+AGMVLTT+A+VV+KP+ Sbjct: 348 RRQLDETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLIHLTKTIESVKAQLKD-EEKVGADLVGIALEAPLTQIADNAGKEGAVVVEKVRDADFSYGYNAMTDTYEDMIAAGVVDPAKVVRSGLQNAGSIAGMVLTTEALVVDKPE 525 The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bpback to top |