BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:377..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_NAUPA (60 kDa chaperonin OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=groL PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.917e-43
Identity = 95/193 (49.22%), Postives = 131/193 (67.88%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            K+   ET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAA++  + ++      +EDADE++G DIV++A+ AP   IA NA            +++  TG+NA T +Y +M +AG+IDP KV R ALQNA SV  ++LTT+A V E P+ + + +  D    G
Sbjct:  351 KKEIEETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAAILKAAKNISV---NVEDADEKIGVDIVKQAVKAPIKQIAKNAGFEPGIVAMKVEEADENTGFNAATGEYVDMFKAGIIDPTKVERIALQNAVSVGSLLLTTEAAVTEVPEDKPAPAAPDMGGMG 540          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.917e-43
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            KR    TDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG+ L+H+S  + A+   LE  D++ G +IVQ+AL AP   IA NA            +S    G+NA+T  +E+++ AG++D +KV R ALQ+A S+A +V+TT+ +V +KP+
Sbjct:  348 KRELDNTDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLHISAELDALTSGLE-GDQKTGVEIVQRALSAPLRQIAENAGSNGDVVVDRVRNS--GEGFNALTGNFEDLMNAGILDASKVVRLALQDAVSIASLVVTTEVVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACZE (60 kDa chaperonin OS=Lactobacillus zeae GN=groL PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.503e-43
Identity = 96/178 (53.93%), Postives = 123/178 (69.10%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            K+   +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV   D +PA+    E+ D + G +IV +AL  P   IA NA              +   GYNA TD++E+M ++G+IDP KVTR ALQNAASVA ++LTT+A+V +KP
Sbjct:  348 KKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDMAKSGIIDPTKVTRSALQNAASVAALMLTTEAVVADKP 522          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACCB (60 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groL PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.503e-43
Identity = 96/178 (53.93%), Postives = 123/178 (69.10%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            K+   +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV   D +PA+    E+ D + G +IV +AL  P   IA NA              +   GYNA TD++E+M ++G+IDP KVTR ALQNAASVA ++LTT+A+V +KP
Sbjct:  348 KKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDMAKSGIIDPTKVTRSALQNAASVAALMLTTEAVVADKP 522          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACC3 (60 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groL PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.503e-43
Identity = 96/178 (53.93%), Postives = 123/178 (69.10%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            K+   +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV   D +PA+    E+ D + G +IV +AL  P   IA NA              +   GYNA TD++E+M ++G+IDP KVTR ALQNAASVA ++LTT+A+V +KP
Sbjct:  348 KKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDMAKSGIIDPTKVTRSALQNAASVAALMLTTEAVVADKP 522          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.503e-43
Identity = 95/176 (53.98%), Postives = 124/176 (70.45%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG +L+++   +PA++  L +  ADE  G  +V +AL AP   IA NA            +     GYNA T +Y +M+  G++DPAKVTR ALQNAASV+ M LTT+A++ +KP+
Sbjct:  353 ETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTSLINV---IPAVRALLSEVTADEATGVKLVLRALEAPVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTEAVIADKPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_ANASL (60 kDa chaperonin 1 OS=Anabaena sp. (strain L31) GN=groL1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.503e-43
Identity = 96/183 (52.46%), Postives = 124/183 (67.76%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +R   ET+S YD  KL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  + A  +     +E  GA IV +AL AP   IA NA            + E+   +NA T+++ +M  AG++DPAKVTR ALQNA S A MVLTT   VV+KP+ +++
Sbjct:  348 RRQMEETESSYDKGKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEAWANSTLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKEFNVDFNAATNEFVDMFSAGIVDPAKVTRSALQNALSYACMVLTT-GTVVDKPEPKDA 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACJO (60 kDa chaperonin OS=Lactobacillus johnsonii GN=groL PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 98/180 (54.44%), Postives = 123/180 (68.33%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVP-AIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K+   +T S +D EKL ER+AKL+GGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV +   +   +K   EDA+   G  IV KAL AP   IA NA              +   GYNA T+K+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+V + P+
Sbjct:  348 KKQIADTTSDFDREKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQGTVKGDSEDAE--TGVKIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEVGYNAATNKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAVVADAPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GUITH (60 kDa chaperonin, chloroplastic OS=Guillardia theta GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 96/184 (52.17%), Postives = 125/184 (67.93%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED---ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 582
            C   +R    +DS Y+ EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG+ L HL++    +KD  ED    DE +GA IV+++L +P   I  N             +SE+  GY+A   +  +M   G+IDPAKVTR  LQNAAS+A M+LTT+ IVV+K
Sbjct:  345 CEQIRRQIEASDSSYEREKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGSTLTHLAND---LKDWAEDNLIEDELIGALIVERSLTSPLRRIIENTGQNSAIIIEQIKESEFNIGYDAAKGEIVDMYDVGIIDPAKVTRSGLQNAASIASMILTTECIVVDK 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GEOTN (60 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++   V AI+    + DE  G  IV +A+  P   IA NA            + +   G+NA T ++ +M++ G++DP KVTR ALQNAASVA MVLTT+A+V +KP+    G+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYSKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSIIVERLKNEKAGIGFNAATGEWVDMIEEGIVDPTKVTRSALQNAASVAAMVLTTEAVVADKPEENKGGA 529          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_NAUPA1.917e-4349.2260 kDa chaperonin OS=Nautilia profundicola (strain... [more]
CH601_SYNS31.917e-4353.0760 kDa chaperonin 1 OS=Synechococcus sp. (strain C... [more]
CH60_LACZE2.503e-4353.9360 kDa chaperonin OS=Lactobacillus zeae GN=groL PE... [more]
CH60_LACCB2.503e-4353.9360 kDa chaperonin OS=Lactobacillus casei (strain B... [more]
CH60_LACC32.503e-4353.9360 kDa chaperonin OS=Lactobacillus casei (strain A... [more]
CH60_EXISA2.503e-4353.9860 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH601_ANASL2.503e-4352.4660 kDa chaperonin 1 OS=Anabaena sp. (strain L31) G... [more]
CH60_LACJO3.269e-4354.4460 kDa chaperonin OS=Lactobacillus johnsonii GN=gr... [more]
CH60_GUITH3.269e-4352.1760 kDa chaperonin, chloroplastic OS=Guillardia the... [more]
CH60_GEOTN3.269e-4352.7860 kDa chaperonin OS=Geobacillus thermodenitrifica... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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