BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOBL (60 kDa chaperonin OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 96/179 (53.63%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +T S +D EKL ER+AKL+GGVAVI+VGAATETEL++ KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA             +E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A V + P+ +N+
Sbjct:  353 DTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENT 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOBK (60 kDa chaperonin OS=Clostridium botulinum (strain Okra / Type B1) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 96/179 (53.63%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +T S +D EKL ER+AKL+GGVAVI+VGAATETEL++ KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA             +E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A V + P+ +N+
Sbjct:  353 DTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENT 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOBJ (60 kDa chaperonin OS=Clostridium botulinum (strain Kyoto / Type A2) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 96/179 (53.63%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +T S +D EKL ER+AKL+GGVAVI+VGAATETEL++ KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA             +E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A V + P+ +N+
Sbjct:  353 DTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENT 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOBH (60 kDa chaperonin OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 96/179 (53.63%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +T S +D EKL ER+AKL+GGVAVI+VGAATETEL++ KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA             +E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A V + P+ +N+
Sbjct:  353 DTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENT 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOB1 (60 kDa chaperonin OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 96/179 (53.63%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +T S +D EKL ER+AKL+GGVAVI+VGAATETEL++ KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA             +E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A V + P+ +N+
Sbjct:  353 DTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENT 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 94/184 (51.09%), Postives = 124/184 (67.39%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K    ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+     + DE  G +IV +AL  P   IAHNA              E   G+NA T ++ NM++AG++DP KVTR ALQ+AASV+ M LTT+A++ +KP+    G
Sbjct:  348 KAQIEETTSDFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVSSIGAEGDEATGVNIVLRALEEPVRQIAHNAGLEGSVIVERLKKEEAGFGFNAATGEWVNMVEAGIVDPTKVTRSALQHAASVSAMFLTTEAVIADKPEENEGG 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ANATD (60 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 95/185 (51.35%), Postives = 128/185 (69.19%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            K+   ET S +D EKL ER+AKL+GGVAVI VGAATETEL+++KLRIEDA  AT AA+EEGIVPGGG AL++    +PA+   +E    DE+ GA IV+KAL  P   IA NA            +S    G++A+ +++ +M +AG++DP KVTR A+QNAAS A M+LTT+A+V EKP+ + +
Sbjct:  349 KKQIEETTSDFDREKLQERLAKLAGGVAVIHVGAATETELKEKKLRIEDALAATKAAVEEGIVPGGGTALINA---IPALDKLIESLTGDEKTGAMIVRKALEEPLRQIAENAGLDGSVIVNKVKESPAGVGFDALNERFVDMFEAGIVDPTKVTRTAIQNAASAAAMLLTTEAVVAEKPEKEKN 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.269e-43
Identity = 94/194 (48.45%), Postives = 128/194 (65.98%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            +R  ++T S YD EKL ER+AKL+GGVAVI VGAATETE++++K R++DA +AT AA+EEGIVPGGG AL+     +  +K    + DE  GA IV +A+ AP   +A NA              + T  GYN  TDKYE++L AGV+DP KVTR ALQNAAS+AG++LTT+ ++ +KP+ ++    S     G
Sbjct:  349 RRQIKDTTSDYDREKLQERLAKLAGGVAVIHVGAATETEMKEKKARVDDALHATRAAVEEGIVPGGGVALIRAQKAIDTLK---LEGDEATGAQIVYRAVEAPLRQLACNAGREGALIVANVKGMKNTAEGYNVATDKYEDLLSAGVVDPTKVTRSALQNAASIAGLLLTTECVIADKPEKKSCSCGSGASDMG 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.270e-43
Identity = 90/180 (50.00%), Postives = 126/180 (70.00%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            ET+  Y+ EKL ERIA+LSGGVA+I+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG  L+ LS  V +IK+ L + ++++GADI+++AL  P  LIA+NA            D+  +   GYNA TD +E++++AG+IDP KV RC+L+NA SVA   L    +V E P+ + +
Sbjct:   70 ETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVVVTEIPEKEKA 249          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.270e-43
Identity = 98/193 (50.78%), Postives = 131/193 (67.88%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSY 627
            K    +T S Y+ E L ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEGIVPGGG  L+     V  I ++L D DE++GA IV +AL AP + IA NA            + +    G++A+  +Y +M + G+IDPAKVTR ALQNAAS+AGM+LTT+ +VVEKP+ +N+    +   Y
Sbjct:  348 KAQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKPVEKIVEEL-DGDEKIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNPMPEMPEY 539          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CLOBL3.269e-4353.6360 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBK3.269e-4353.6360 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBJ3.269e-4353.6360 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBH3.269e-4353.6360 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOB13.269e-4353.6360 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_BACHD3.269e-4351.0960 kDa chaperonin OS=Bacillus halodurans GN=groL P... [more]
CH60_ANATD3.269e-4351.3560 kDa chaperonin OS=Anaerocellum thermophilum (st... [more]
CH60_AKKM83.269e-4348.4560 kDa chaperonin OS=Akkermansia muciniphila (stra... [more]
RUBC_CHLRE4.270e-4350.00RuBisCO large subunit-binding protein subunit beta... [more]
CH60_THEM44.270e-4350.7860 kDa chaperonin OS=Thermosipho melanesiensis (st... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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