BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            K    +T S Y+ E L ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEGIVPGGG  L+     V  +  +L D DE++GA IV KAL AP   IA NA             S E + G++A+  +Y +M +AG+IDPAKVTR ALQNAAS+AGM+LTT+ +VVEKP+ +   +
Sbjct:  348 KSQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLIRSRKAVEDVLKEL-DGDEKVGAMIVYKALEAPIRQIAENAGYDGAVIIEKILASKEESYGFDALKGEYTDMFKAGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKEAA 532          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRAG (60 kDa chaperonin OS=Streptococcus agalactiae GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K     T S +D EKL ER+AKL+GGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+V  KP+ +
Sbjct:  348 KSQMEATTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYKGSVIIARLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K     T S +D EKL ER+AKL+GGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+V  KP+ +
Sbjct:  348 KSQMEATTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K     T S +D EKL ER+AKL+GGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+V  KP+ +
Sbjct:  348 KSQMEATTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRA1 (60 kDa chaperonin OS=Streptococcus agalactiae serotype Ia GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K     T S +D EKL ER+AKL+GGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+V  KP+ +
Sbjct:  348 KSQMEATTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STAS1 (60 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 95/187 (50.80%), Postives = 129/187 (68.98%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRS 612
            K    ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG A +++ + V  I+    + D   G +IV KAL AP   IA NA            +++   G+NA T+++ NML+AG++DP KVTR +LQ+AASVA M LTT+A+V   P+  N+ +++
Sbjct:  348 KAQIEETDSEFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTAFMNIYEKVAKIE---AEGDIATGINIVLKALEAPVRQIAENAGLEGSIIVERLKNADIGVGFNAATNEWVNMLEAGIVDPTKVTRSSLQHAASVAAMFLTTEAVVANIPEESNNDAQA 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STAAR (60 kDa chaperonin OS=Staphylococcus aureus (strain MRSA252) GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 97/182 (53.30%), Postives = 124/182 (68.13%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQN 597
            K    ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA            ++E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+V   P+  N
Sbjct:  348 KSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEVGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEKNN 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GEOSW (60 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++ + V AI+    + DE  G  IV +A+  P   IA NA              +   G+NA T ++ +M++AG++DP KVTR ALQNAASVA M LTT+A+V +KP+    G+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYNKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSVIVERLKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEENKGGN 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 93/169 (55.03%), Postives = 120/169 (71.01%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIV 573
            ET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLR+EDA  AT AA+EEGI+ GGG+A +H S  V  +  KLE  DER GA I+ KAL AP S IA NA            + +   G+NA+T+KY +M++ G++DP+KVTR ALQNA SVA   LTT+A V
Sbjct:  353 ETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEKKLRMEDALAATRAAVEEGIIAGGGSAYIHASKEVAKLAAKLE-GDERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTGVGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEAAV 520          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACTR (60 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groL PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43
Identity = 98/188 (52.13%), Postives = 126/188 (67.02%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S +D  KL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++ + V AI+    + DE  G  IV +A+  P   IA NA              +   G+NA T ++ NM++AG++DP KVTR ALQNAASVA M LTT+A+V +KP+ +N G  S     G
Sbjct:  353 ETTSEFDRGKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYNKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSVIVERLKSEKPGIGFNAATGEWVNMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPE-ENKGGNSGMPDMG 536          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_THELT5.576e-4353.2360 kDa chaperonin OS=Thermotoga lettingae (strain ... [more]
CH60_STRAG5.576e-4353.5960 kDa chaperonin OS=Streptococcus agalactiae GN=g... [more]
CH60_STRA55.576e-4353.5960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA35.576e-4353.5960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA15.576e-4353.5960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STAS15.576e-4350.8060 kDa chaperonin OS=Staphylococcus saprophyticus ... [more]
CH60_STAAR5.576e-4353.3060 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_GEOSW5.576e-4352.7860 kDa chaperonin OS=Geobacillus sp. (strain WCH70... [more]
CH60_CLOPH5.576e-4355.0360 kDa chaperonin OS=Clostridium phytofermentans (... [more]
CH60_BACTR5.576e-4352.1360 kDa chaperonin OS=Bacillus thermoglucosidasius ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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