BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRE4 (60 kDa chaperonin OS=Streptococcus equi subsp. equi (strain 4047) GN=groL PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.242e-42
Identity = 96/179 (53.63%), Postives = 122/179 (68.16%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K     T S +D EKL ER+AKL+GGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG AL+++ D V A++    D D   G +IV +AL  P   IA+NA            +S    G+NA T ++ +M+  G+IDP KVTR ALQNAASVAG++LTT+A+V  KP+
Sbjct:  348 KSQLETTTSEFDREKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALINVMDKVAALE---LDGDAATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSAAGIGFNAATGEWVDMIATGIIDPVKVTRSALQNAASVAGLILTTEAVVATKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_DESMR (60 kDa chaperonin OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=groL PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.242e-42
Identity = 93/174 (53.45%), Postives = 122/174 (70.11%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S YD EKL ER+AK+ GGVAVI VGAATETE++++K R+EDA NAT AA+EEGIVPGGG ALV     +  I  K  D DE+ G +IV++A+  P   I+ NA            D +   G+NA T +YE++++AGVIDP KVTR ALQN++SVAG++LTT+A + EKP+
Sbjct:  355 ETTSSYDKEKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALVRCVKSLTGI--KAVDDDEQSGIEIVRRAIEEPLRQISGNAGFEGSIVVAKVRDGKDGFGFNAATGEYEDLIKAGVIDPKKVTRIALQNSSSVAGLLLTTEAAIAEKPE 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 87/173 (50.29%), Postives = 120/173 (69.36%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 579
            +TD  Y+ EKL ERIA+LSGGVA+I+VGA TETEL+++KLR+EDA NAT AA+EEG+VPGGG  L+ LS+ V  IK ++ D ++++GADI+++AL  P  LIA NA             +      GYNA TD +EN+++ G+IDP+KV RC+++NA SVA   L    +V E
Sbjct:  239 QTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVVVTE 411          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACSS (60 kDa chaperonin OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=groL PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 94/179 (52.51%), Postives = 122/179 (68.16%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K+   ET S +D EKL ER+AKL+GGVAVIKVGAATETEL+++K RIEDA NAT AA+EEG V GGG AL+ + + V A++   E+ D + G +IV +AL  P   IA NA                  GYNA    +ENM++AG++DP KVTR ALQNAASVA ++LTT+A+V +KP+
Sbjct:  348 KKQIAETTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEQKYRIEDALNATRAAVEEGYVAGGGTALIDVIESVAALE---EEGDVQTGINIVLRALEEPVRQIATNAGLEGSVIVEKVKSQPVEVGYNAANGNWENMIEAGILDPTKVTRSALQNAASVAALMLTTEAVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CYAME (60 kDa chaperonin, chloroplastic OS=Cyanidioschyzon merolae GN=groL PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 94/182 (51.65%), Postives = 124/182 (68.13%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            C   K+ W  +DS Y+ ++L ER+AKLS GVAVI+VG ATE E++D+KLR++DA NAT AAIEEGIV GGG+ LVH    +      L+  +E+LGA IV KAL AP   IA NA             ++   GY+A   ++ NM++AG+IDPAKVTRCALQNA S+A MVLTT+ ++V+KP
Sbjct:  343 CEQIKQQWARSDSSYEKQQLQERLAKLSSGVAVIQVGGATEAEMKDKKLRLDDAINATRAAIEEGIVAGGGSTLVHFIKPLIEWSHHLK-PEEQLGAQIVAKALSAPLHRIATNA-GQNGSLIVEQVQNQPNLGYDAANHRFVNMIEAGIIDPAKVTRCALQNATSIAAMVLTTECMIVDKP 522          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACWK (60 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groL PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 95/174 (54.60%), Postives = 123/174 (70.69%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA              +   G+NA T ++ NML++G++DPAKVTR ALQNAASVA M LTT+A+V +KP+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 95/174 (54.60%), Postives = 123/174 (70.69%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA              +   G+NA T ++ NML++G++DPAKVTR ALQNAASVA M LTT+A+V +KP+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACC2 (60 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groL PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 95/174 (54.60%), Postives = 123/174 (70.69%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA              +   G+NA T ++ NML++G++DPAKVTR ALQNAASVA M LTT+A+V +KP+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ANOFW (60 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=groL PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 95/174 (54.60%), Postives = 121/174 (69.54%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG AL+++   V AI+    + DE  G  IV +A+  P   IA NA              +   G+NA T ++ +M++AG++DP KVTR ALQNAASVA M LTT+A+V +KP+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTALMNVYSKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSVIVERLKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_PROMA (60 kDa chaperonin 1 OS=Prochlorococcus marinus GN=groL1 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 94/179 (52.51%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            KR   +TDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG+ L+ L + + ++   L D D+  G DI++KAL APA  IA NA                  G+NA T +YE+++ AG+ID  KV R ALQ+A S+A +++TT+ I+ +KP+
Sbjct:  348 KRELDQTDSDYDKEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIKLGEELDSLSKSL-DGDQATGVDIIKKALSAPAKQIALNAGENGDVVVSEI--QRLGKGFNAATGQYEDLISAGIIDAVKVIRLALQDAVSIASLLITTEVIIADKPE 523          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRE41.242e-4253.6360 kDa chaperonin OS=Streptococcus equi subsp. equ... [more]
CH60_DESMR1.242e-4253.4560 kDa chaperonin OS=Desulfovibrio magneticus (str... [more]
RUBB_CHLRE1.622e-4250.29RuBisCO large subunit-binding protein subunit beta... [more]
CH60_LACSS1.622e-4252.5160 kDa chaperonin OS=Lactobacillus sakei subsp. sa... [more]
CH60_CYAME1.622e-4251.6560 kDa chaperonin, chloroplastic OS=Cyanidioschyzo... [more]
CH60_BACWK1.622e-4254.6060 kDa chaperonin OS=Bacillus weihenstephanensis (... [more]
CH60_BACC41.622e-4254.6060 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH60_BACC21.622e-4254.6060 kDa chaperonin OS=Bacillus cereus (strain G9842... [more]
CH60_ANOFW1.622e-4254.6060 kDa chaperonin OS=Anoxybacillus flavithermus (s... [more]
CH601_PROMA1.622e-4252.5160 kDa chaperonin 1 OS=Prochlorococcus marinus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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