BQ623021

Overview
NameBQ623021
Unique NameBQ623021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.930e-15
Identity = 26/72 (36.11%), Postives = 43/72 (59.72%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWTQ 310
            N+   G +CLDIL+ +WSP   ++ +L SI SLL DPN   P   E +++Y+ ++ +Y     E+  +SW +
Sbjct:   80 NVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSWEE 151          

HSP 2 Score: 42.3578 bits (98), Expect = 1.930e-15
Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 1
Query:    1 SDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            +D+P+  G F + +HF   YP KPP V F +++FHP
Sbjct:   44 ADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHP 79          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 2.509e-15
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 313
            N+ + G +CLDIL+ +WSP   ++ VL SI SLL DPN       E +++YK ++ +Y    R   +K
Sbjct:   80 NVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEK 147          

HSP 2 Score: 43.1282 bits (100), Expect = 2.509e-15
Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 1
Query:    1 SDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            +D+P+  G F + +HF   YP KPP V F +++FHP
Sbjct:   44 ADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHP 79          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.209e-15
Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG*RLLG 340
            N+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y S AR  T+ +A G  L G
Sbjct:   87 NVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQGSSLRG 163          

HSP 2 Score: 42.743 bits (99), Expect = 3.209e-15
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 1
Query:    7 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            +PYAGG+F + +    D+P  PPK  F TK+FHP
Sbjct:   53 TPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHP 86          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.257e-15
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS--------DKAKYESTAR 298
            N+++NG+ICLDILK++WSP   +  +L+SI SLL +PN + PL    A ++ +        DK   E+T+R
Sbjct:   82 NVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRYQEATSR 152          

HSP 2 Score: 42.743 bits (99), Expect = 3.257e-15
Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 1
Query:    4 DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            D+ Y    F +++ FP DYP+KPP V F T+ FHP
Sbjct:   47 DTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHP 81          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.261e-15
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR-----SWT 307
            N+ S+G +CLDIL+ +WSP   ++ +L S+ SLL DPN   P   E + +YK  + +YE   R     SWT
Sbjct:   80 NVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150          

HSP 2 Score: 38.5058 bits (88), Expect = 3.261e-15
Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 1
Query:    1 SDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            +++P+  G F + + F   YP KPP V F +++FHP
Sbjct:   44 AETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHP 79          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.211e-15
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 286
            NI +NG +CLDIL+ +WSP   ++ +L S+ SLL DPNP  P   + A ++K +  +YE
Sbjct:   80 NIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYE 138          

HSP 2 Score: 39.2762 bits (90), Expect = 4.211e-15
Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = 1
Query:    4 DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            ++P+  G F +T+ F   YP KPP V F +K+FHP
Sbjct:   45 ETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHP 79          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 4.233e-15
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 1
Query:    7 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            +PY  G F + I+FPP YPF PPK+ F+TK++HP
Sbjct:   44 APYNKGAFRIEINFPPQYPFMPPKILFKTKIYHP 77          

HSP 2 Score: 47.3654 bits (111), Expect = 4.233e-15
Identity = 20/71 (28.17%), Postives = 40/71 (56.34%), Query Frame = 2
Query:  110 NINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 319
            N++  G +CL I+  + W P     +VL ++ +++ +P P+ PL  ++A  +  +  K+  TA  +T+K A
Sbjct:   78 NVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKNA 148          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 4.239e-15
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 307
            N+ ++GSICLDIL+ QWSP   I+ +L SI SLL DPNP+ P   E A +++ +K +Y     E   +SW+
Sbjct:   80 NVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWS 150          

HSP 2 Score: 34.6538 bits (78), Expect = 4.239e-15
Identity = 14/35 (40.00%), Postives = 21/35 (60.00%), Query Frame = 1
Query:    4 DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            DS + G  F +++ F  +YP   P V F +K+FHP
Sbjct:   45 DSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHP 79          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.142e-15
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 319
            N+  +G++CL IL E+  W PA+TI ++LL I  LL DPN   P   E   M+K DK +YE   R+  ++ A
Sbjct:   85 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 156          

HSP 2 Score: 39.2762 bits (90), Expect = 7.142e-15
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1
Query:   13 YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            + GG++ +T+ FP +YP +PPK  F   +FHP
Sbjct:   53 WEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 84          
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.152e-15
Identity = 30/77 (38.96%), Postives = 43/77 (55.84%), Query Frame = 2
Query:  110 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG*RLLG 340
            N+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y S AR  T  +A G  L G
Sbjct:   87 NVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQGTSLRG 163          

HSP 2 Score: 41.9726 bits (97), Expect = 9.152e-15
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 1
Query:    7 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 108
            +PYAGG+F + +    D+P  PPK  F TK+FHP
Sbjct:   53 TPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHP 86          
The following BLAST results are available for this feature:
BLAST of BQ623021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
UBC2_EMENI1.930e-1536.11Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_NEUCR2.509e-1538.24Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBE2S_XENTR3.209e-1538.96Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropi... [more]
UBE2C_DICDI3.257e-1540.85Probable ubiquitin-conjugating enzyme E2 C OS=Dict... [more]
UBC2_YARLI3.261e-1540.85Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_CRYNE4.211e-1544.07Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus ... [more]
UBC84_DROME4.233e-1555.88Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophi... [more]
UBC2_DICDI4.239e-1545.07Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium... [more]
UBC9_SCHPO7.142e-1541.67SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyce... [more]
UB2SB_XENLA9.152e-1538.96Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus lae... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00112 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00112 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623021 ID=BQ623021; Name=BQ623021; organism=Citrus sinensis; type=EST; length=526bp
TCTGATAGCCCATATGCAGGAGGTGTATTTTTAGTTACCATTCATTTTCC
TCCTGATTATCCTTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCT
TCCACCCTGAACATCAACAGCAATGGAAGCATCTGTCTTGATATCCTTAA
AGAACAGTGGAGTCCAGCGCTTACCATTTCAAAGGTCCTGCTCTCTATCT
GCTCCTTGCTTACTGATCCAAATCCCGACGACCCTCTTGTACCGGAGATT
GCCCACATGTACAAGTCCGACAAGGCCAAATATGAATCCACGGCCAGGAG
CTGGACACAGAAGTATGCCATGGGATGAAGGTTGTTAGGATATTGCAGAA
AAAGGAGCATTTATTGAAATATGTTGTGTGTGTTGTCTATCTATTTTCTT
TAACTTGCTTTGGGGAGGGCAGACGTTGGTGTTTTAGAATGGTGTTGGGA
GGAGTTGCAAGGGCGGGACGTTTTTATGTTAATGTTGAATGTTTGTGTTT
GAAGCTTCTTCGATGGAACGTAGTTA
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