BQ623044

Overview
NameBQ623044
Unique NameBQ623044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length372
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623044_ssr1 microsatellite BQ623044_ssr1:1..12. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12813 contig Csv1_Contig12813:131..502. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_ECOL6 (Methionine aminopeptidase OS=Escherichia coli O6 GN=map PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.884e-14
Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEP-IIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            + GHG+G+ FH EP +++++  E    +  G TFTIEP++  G  E  T  D WT  T D S +AQ+EH+I++T  G EILT+
Sbjct:  168 YCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTL 250          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_ECO57 (Methionine aminopeptidase OS=Escherichia coli O157:H7 GN=map PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.884e-14
Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEP-IIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            + GHG+G+ FH EP +++++  E    +  G TFTIEP++  G  E  T  D WT  T D S +AQ+EH+I++T  G EILT+
Sbjct:  168 YCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTL 250          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_HAEIN (Methionine aminopeptidase OS=Haemophilus influenzae GN=map PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.482e-14
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            + GHGVG  FH EP + H   ++ G +++ G  FTIEP++  G  E     D WT  T D S +AQ+EH +++T TG E++TI
Sbjct:  169 YCGHGVGTEFHCEPQVLHYYADDGGVILKPGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLIVTETGCEVMTI 251          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_BUCBP (Methionine aminopeptidase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=map PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.159e-14
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNR--NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            + GHG+G+ FH  P I H+     N   +  G TFT+EP++  GS E     D WT  T D S +AQ+EH+IL+   G EILT+
Sbjct:  169 YCGHGIGRSFHEPPQILHHNYYKSNTTILQSGMTFTVEPMINSGSCEVQCTNDGWTVKTKDKSLSAQYEHTILVNEEGCEILTL 252          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_BUCAI (Methionine aminopeptidase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=map PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.350e-14
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILT 301
            + GHG+G+ FH EP + H +N+    +++ G  FTIEP++  G+ E     D WT  T D S +AQ+EH++L+T  G +ILT
Sbjct:  168 YCGHGIGRNFHEEPHVLHYKNKKNNIILKKGMIFTIEPMINSGNPEVKCMKDGWTVKTKDRSLSAQYEHTVLVTEYGCDILT 249          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM1_BACSU (Methionine aminopeptidase 1 OS=Bacillus subtilis GN=map PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILT 301
            +VGHGVG+  H +P I H    N G  ++ G    IEP++  GS    T  DNWT +T DG   A FEH+I IT TG +ILT
Sbjct:  165 YVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILT 246          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_RICPR (Methionine aminopeptidase OS=Rickettsia prowazekii GN=map PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEP-IIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWP-DNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            + GHG+G+VFH +P I+ + RN     + EG  FT+EP++  G+ + I    D WT  T D S +AQFEH+I +T+ G EI T+
Sbjct:  166 YTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDGFEIFTL 249          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_BACHD (Methionine aminopeptidase OS=Bacillus halodurans GN=map PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILT 301
            +VGHGVG+  H +P I H      G  ++ G    IEP++  GS    T  DNWT +T DG   A FEH+I IT TG EILT
Sbjct:  165 YVGHGVGQNLHEDPQIPHYGPPGKGPRLKPGMVLAIEPMVNAGSRYVRTLSDNWTVVTVDGKKCAHFEHTIAITETGYEILT 246          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM3_SYNY3 (Putative methionine aminopeptidase C OS=Synechocystis sp. (strain PCC 6803) GN=sll0555 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNR-NENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILT 301
            F GHGVG+  H +P +++ R  + P   ++ G T  IEPI+  GS    T  D WT +T D + +AQFEH++L+T TG E+LT
Sbjct:  218 FTGHGVGQALHEDPHVFNVRCRDLPNVKLKPGMTLAIEPIVNAGSRFTRTLGDRWTVVTVDNALSAQFEHTVLVTATGYELLT 300          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM2_SYNY3 (Putative methionine aminopeptidase B OS=Synechocystis sp. (strain PCC 6803) GN=slr0786 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   62 VGHGVGKVFHSEPIIYHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            VGHG+G+  H+E  I H      G  +  G  FT+EP+L  G+ E     D WT +T D   +AQFEH++++T  G EILT+
Sbjct:  192 VGHGIGRQMHTELQIPHYGKRGSGLKLRPGMVFTVEPMLNEGTYELTFLADGWTVITKDKKLSAQFEHTVVVTEEGVEILTL 273          
The following BLAST results are available for this feature:
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
AMPM_ECOL61.884e-1443.37Methionine aminopeptidase OS=Escherichia coli O6 G... [more]
AMPM_ECO571.884e-1443.37Methionine aminopeptidase OS=Escherichia coli O157... [more]
AMPM_HAEIN5.482e-1442.17Methionine aminopeptidase OS=Haemophilus influenza... [more]
AMPM_BUCBP7.159e-1442.86Methionine aminopeptidase OS=Buchnera aphidicola s... [more]
AMPM_BUCAI9.350e-1441.46Methionine aminopeptidase OS=Buchnera aphidicola s... [more]
AMPM1_BACSU3.553e-1346.34Methionine aminopeptidase 1 OS=Bacillus subtilis G... [more]
AMPM_RICPR7.916e-1342.86Methionine aminopeptidase OS=Rickettsia prowazekii... [more]
AMPM_BACHD7.916e-1346.34Methionine aminopeptidase OS=Bacillus halodurans G... [more]
AMPM3_SYNY31.034e-1243.37Putative methionine aminopeptidase C OS=Synechocys... [more]
AMPM2_SYNY31.763e-1241.46Putative methionine aminopeptidase B OS=Synechocys... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00135 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00135 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623044 ID=BQ623044; Name=BQ623044; organism=Citrus sinensis; type=EST; length=372bp
GAGAGAGAGAGAACTAGTGAGCACGCTGAGAAATATGGTTTCGGTGTAGT
GGAACCGTTTTGTTGGGCATGGCGTAGGGAAAGTCTTTCATTCCGAGCCA
ATCATATATCATAACCGTAATGAAAATCCTGGCTGTATGGTTGAAGGTCA
AACATTTACAATTGAACCAATTCTTACAATGGGAAGCATTGAGTGTATAA
CTTGGCCTGACAACTGGACGACTTTGACTGCTGATGGCAGCCCTGCTGCA
CAGTTTGAGCATTCTATTTTAATTACTAGAACTGGCGCAGAAATTTTAAC
AATATGTTGAAACAATCATTTGATTACTAATAATTTTTGGCCACATTGTA
CAATAATATAAGTACATGGTGA
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