BQ623044

Overview
NameBQ623044
Unique NameBQ623044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length372
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_AQUAE (Methionine aminopeptidase OS=Aquifex aeolicus GN=map PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 2
Query:   56 RFVGHGVGKVFHSEPIIYHNRNE----NPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILT 301
            R+ GHGVG+  H EP + +N  +    NP  + +G    IEP+L++G+ E +   D WT  T DGS AA FEH++ IT+ G  ILT
Sbjct:  172 RYGGHGVGRKVHQEPFVPNNVKDIGKKNPR-LRQGMVIAIEPMLSIGTEETVEDGDGWTVKTKDGSLAAHFEHTVAITKKGPVILT 256          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_MYCCT (Methionine aminopeptidase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=map PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNRNENPGCMV-EGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILT 301
            + GHG+G   H +P I +    N G  + EG    IEP++ MG+ +     D WT  +AD S  A FEH+ILIT+ G E+LT
Sbjct:  166 YTGHGIGLALHEDPYIPNYGIPNTGIRLQEGMVICIEPMVQMGTYKTKIADDKWTVYSADHSITAHFEHTILITKDGCEVLT 247          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_CLOAB (Methionine aminopeptidase OS=Clostridium acetobutylicum GN=map PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPII--YHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTIC 307
            +VGHG+GK  H +P +  Y      P  +V G    IEP++ +G+    T  ++WT +T DGS AA +E+++ I   G EILT+C
Sbjct:  166 YVGHGIGKEMHEDPEVPNYGRPGRGPK-LVHGMVLAIEPMVDVGTYMVKTQSNDWTVVTQDGSLAAHYENTVAILDNGPEILTLC 249          
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Match: AMPM_CLOPE (Methionine aminopeptidase OS=Clostridium perfringens GN=map PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 2
Query:   59 FVGHGVGKVFHSEPIIYHNRNENPGC-MVEGQTFTIEPILTMGSIECITWPDNWTTLTADGSPAAQFEHSILITRTGAEILTI 304
            FVGHG+G+  H +P + +      G  ++ G    IEP++ MGS    T  D WT +TADG  +A +E+++ I   G EILT+
Sbjct:  165 FVGHGIGRKVHEDPEVPNFGRPGRGPKLMAGMVLAIEPMVNMGSYRVKTLDDGWTVVTADGKLSAHYENTVAILPNGPEILTL 247          
The following BLAST results are available for this feature:
BLAST of BQ623044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
AMPM_AQUAE3.008e-1243.02Methionine aminopeptidase OS=Aquifex aeolicus GN=m... [more]
AMPM_MYCCT1.950e-1141.46Methionine aminopeptidase OS=Mycoplasma capricolum... [more]
AMPM_CLOAB3.326e-1138.82Methionine aminopeptidase OS=Clostridium acetobuty... [more]
AMPM_CLOPE9.676e-1138.55Methionine aminopeptidase OS=Clostridium perfringe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00135 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00135 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623044 ID=BQ623044; Name=BQ623044; organism=Citrus sinensis; type=EST; length=372bp
GAGAGAGAGAGAACTAGTGAGCACGCTGAGAAATATGGTTTCGGTGTAGT
GGAACCGTTTTGTTGGGCATGGCGTAGGGAAAGTCTTTCATTCCGAGCCA
ATCATATATCATAACCGTAATGAAAATCCTGGCTGTATGGTTGAAGGTCA
AACATTTACAATTGAACCAATTCTTACAATGGGAAGCATTGAGTGTATAA
CTTGGCCTGACAACTGGACGACTTTGACTGCTGATGGCAGCCCTGCTGCA
CAGTTTGAGCATTCTATTTTAATTACTAGAACTGGCGCAGAAATTTTAAC
AATATGTTGAAACAATCATTTGATTACTAATAATTTTTGGCCACATTGTA
CAATAATATAAGTACATGGTGA
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