BQ623048

Overview
NameBQ623048
Unique NameBQ623048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.984e-78
Identity = 135/163 (82.82%), Postives = 146/163 (89.57%), Query Frame = 2
Query:  101 PRIVDMNFRCSMDPLAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSRPPNPQ 589
            P      F+     + WSVGATLGYAQAA DKRVIACIGDGSFQVTAQ+ISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTG V+AIHNG+GKCWTAKVR+E++LTEA+ TATG +KDSLCFIEVF HKDDTSKELLEWGSRV+AANSRPPNPQ
Sbjct:  431 PENCGYEFQMQYGSIGWSVGATLGYAQAATDKRVIACIGDGSFQVTAQDISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGFVSAIHNGQGKCWTAKVRTEEDLTEAIATATGAEKDSLCFIEVFAHKDDTSKELLEWGSRVAAANSRPPNPQ 593          

HSP 2 Score: 27.335 bits (59), Expect = 1.984e-78
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3
Query:    3 VLFKHIQDMLSGDT 44
            VLFKHIQ ++SGDT
Sbjct:  399 VLFKHIQALISGDT 412          

HSP 3 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   46 AVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            AVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG
Sbjct:  413 AVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 446          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC2_MAIZE (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea mays GN=PDC2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.189e-48
Identity = 90/106 (84.91%), Postives = 97/106 (91.51%), Query Frame = 2
Query:  272 QRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSRPPNPQ 589
            Q SIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV A HNGEG C+TAKVR+E+ELTEA++ A G +KD LCFIEV VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:    1 QNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVEAFHNGEGACYTAKVRTEEELTEALEAALGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 106          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.338e-42
Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIH------NGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSRPP 580
            + WSV A  GYA  A ++R I  +GDGSFQ+TAQE++ M+R     IIFLINN GYTIEV IHDGPYN IKNWDY GL+   +      +G GK    K ++  EL EA+K A     D    IE F+ ++D ++EL++WG RV+AANSR P
Sbjct:  415 IGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGK--GLKAKTGGELAEAIKVALA-NTDGPTLIECFIGREDCTEELVKWGKRVAAANSRKP 563          

HSP 2 Score: 49.6766 bits (117), Expect = 1.338e-42
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 1
Query:   49 VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            VIAETGDSWFN Q+++LP     E++MQ+G IG
Sbjct:  384 VIAETGDSWFNAQRMKLPNGARVEYEMQWGHIG 416          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC3_SCHPO (Probable pyruvate decarboxylase C186.09 OS=Schizosaccharomyces pombe GN=SPAC186.09 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.204e-40
Identity = 74/146 (50.68%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSRPP 580
            + WSV +  GYA  A  + V+  +GDGSFQ T QE+S M+R     I+FLINN GYTIEVEIHDGPYN IKNWDY  +V A + GEG     +V +  EL EA++ A  E       IE  + +DD SKEL+ WG  V AAN +PP
Sbjct:  425 IGWSVPSAFGYAIGAPKRNVVVFVGDGSFQETVQEVSQMVRLNLPIIMFLINNRGYTIEVEIHDGPYNRIKNWDYAAIVEAFNAGEGHAKGFRVGNGHELAEAIRQAK-ENSQGPTLIECNIDQDDCSKELINWGHNVGAANGKPP 569          

HSP 2 Score: 40.0466 bits (92), Expect = 1.204e-40
Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 1
Query:   49 VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            +  +TGDSWF   ++ LPE   +E +MQ+G IG
Sbjct:  394 LFVDTGDSWFGGMRITLPEKARFEIEMQWGHIG 426          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 3.469e-40
Identity = 68/146 (46.58%), Postives = 98/146 (67.12%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSRPP 580
            + WSV + +GYA AA ++R I  +GDGSFQ+T QEIS MIR     +IFL+NN GYTIE++IHDGPYN I+NWD+     +++   GK      ++ +ELT A+K A  + K+    IE  +  DD ++EL++WG  V++AN+RPP
Sbjct:  421 IGWSVPSAMGYAVAAPERRTIVMVGDGSFQLTGQEISQMIRHKLPVLIFLLNNRGYTIEIQIHDGPYNRIQNWDFAAFCESLNGETGKAKGLHAKTGEELTSAIKVAL-QNKEGPTLIECAIDTDDCTQELVDWGKAVASANARPP 565          

HSP 2 Score: 41.9726 bits (97), Expect = 3.469e-40
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 1
Query:   55 AETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            AETGDSWFN  +++LP    +E +MQ+G IG
Sbjct:  392 AETGDSWFNGLQMKLPAGAKFEVEMQWGHIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.880e-39
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSRPP 580
            + WS+ A  GYA    D+  I  +GDGSFQVTAQE+S M+R      I LINN GYTIEVEIHDG YN IKNWDY  LV A ++ +G        +  EL +A+K A    K+    IE  + +DD SKEL+ WG  V+AAN+RPP
Sbjct:  419 IGWSIPAAFGYALRHPDRHTIVLVGDGSFQVTAQEVSQMVRFKVPITIMLINNRGYTIEVEIHDGSYNKIKNWDYAMLVEAFNSTDGHAKGLLANTAGELADAIKVAE-SHKEGPTLIECTIDQDDCSKELITWGHYVAAANARPP 563          

HSP 2 Score: 40.817 bits (94), Expect = 2.880e-39
Identity = 16/34 (47.06%), Postives = 24/34 (70.59%), Query Frame = 1
Query:   46 AVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            ++  +TGDSWFN  +L+LP    +E +MQ+G IG
Sbjct:  387 SLFVDTGDSWFNGIQLKLPPGAKFEIEMQWGHIG 420          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.908e-26
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 2
Query:  101 PRIVDMNFRCSMDPLAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYT 313
            P+     F+     + WSVGATLGYAQAA +KRVIACIGDGSFQVTAQ+ISTM+RCGQR+IIFLINNGGYT
Sbjct:  348 PKGCGYEFQMQYGSIGWSVGATLGYAQAAPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYT 418          

HSP 2 Score: 27.335 bits (59), Expect = 9.908e-26
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 3
Query:    3 VLFKHIQDMLSGDT 44
            VLF+HIQ+MLSGD+
Sbjct:  316 VLFQHIQNMLSGDS 329          

HSP 3 Score: 71.2478 bits (173), Expect = 5.216e-12
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 1
Query:   49 VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            VIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIG
Sbjct:  331 VIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIG 363          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_YEAST (Pyruvate decarboxylase isozyme 1 OS=Saccharomyces cerevisiae GN=PDC1 PE=1 SV=7)

HSP 1 Score: 87.4261 bits (215), Expect = 1.905e-19
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGP---YNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + ++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMIR G +  +F++NN GYTIE  IH GP   YN I+ WD+  L+     G     T +V +  E  +  +  +      +  IE+ +   D  + L+E     +A N++
Sbjct:  415 IGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH-GPKAQYNEIQGWDHLSLLPTF--GAKDYETHRVATTGEWDKLTQDKSFNDNSKIRMIEIMLPVFDAPQNLVEQAKLTAATNAK 562          

HSP 2 Score: 28.4906 bits (62), Expect = 1.905e-19
Identity = 16/40 (40.00%), Postives = 20/40 (50.00%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGLVS 156
            E   VIAETG S F   +   P N     Q+ +GSIG  +
Sbjct:  380 EGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTT 419          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC6_YEAST (Pyruvate decarboxylase isozyme 3 OS=Saccharomyces cerevisiae GN=PDC6 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 1.198e-18
Identity = 62/152 (40.79%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGP---YNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLC-FIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + ++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMIR G +  +F++NN GYTIE  IH GP   YN I+ WD+  L+ A   G  K    K+ +  E  +A+ T +  QK+S+   IE+ +   D  + L++     +A N++
Sbjct:  415 IGFTTGATLGAAFAAEEIDPNKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH-GPHAEYNEIQTWDHLALLPAF--GAKKYENHKIATTGE-WDALTTDSEFQKNSVIRLIELKLPVFDAPESLIKQAQLTAATNAK 562          

HSP 2 Score: 25.0238 bits (53), Expect = 1.198e-18
Identity = 13/40 (32.50%), Postives = 21/40 (52.50%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGLVS 156
            E   +I+ETG S F   +   P++     Q+ +GSIG  +
Sbjct:  380 EGDVIISETGTSAFGINQTIFPKDAYGISQVLWGSIGFTT 419          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC5_YEAST (Pyruvate decarboxylase isozyme 2 OS=Saccharomyces cerevisiae GN=PDC5 PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 1.557e-18
Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGP---YNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + ++VGA LG   AA++    KRVI  IGDGS Q+T QEISTMIR G +  IF++NN GYTIE  IH GP   YN I+ WD+  L+     G     T +V +  E  +  +    +    +  IEV +   D  + L++     +A N++
Sbjct:  415 IGFTVGALLGATMAAEELDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYIFVLNNNGYTIEKLIH-GPHAEYNEIQGWDHLALLPTF--GARNYETHRVATTGEWEKLTQDKDFQDNSKIRMIEVMLPVFDAPQNLVKQAQLTAATNAK 562          

HSP 2 Score: 26.1794 bits (56), Expect = 1.557e-18
Identity = 15/37 (40.54%), Postives = 19/37 (51.35%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   VIAETG S F   +   P +     Q+ +GSIG
Sbjct:  380 EGDIVIAETGTSAFGINQTTFPTDVYAIVQVLWGSIG 416          
The following BLAST results are available for this feature:
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC1_PEA1.984e-7882.82Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC2_MAIZE1.189e-4884.91Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea... [more]
PDC_ZYMMO1.338e-4250.66Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
PDC3_SCHPO1.204e-4050.68Probable pyruvate decarboxylase C186.09 OS=Schizos... [more]
PDC2_SCHPO3.469e-4046.58Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]
PDC_NEUCR2.880e-3950.00Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
PDC1_TOBAC9.908e-2673.24Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]
PDC1_YEAST1.905e-1937.75Pyruvate decarboxylase isozyme 1 OS=Saccharomyces ... [more]
PDC6_YEAST1.198e-1840.79Pyruvate decarboxylase isozyme 3 OS=Saccharomyces ... [more]
PDC5_YEAST1.557e-1837.75Pyruvate decarboxylase isozyme 2 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00139 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623048 ID=BQ623048; Name=BQ623048; organism=Citrus sinensis; type=EST; length=662bp
ATGTTCTCTTCAAACACATTCAGGACATGCTGAGTGGAGACACCTGCAGT
AATCGCTGAAACTGGAGACTCTTGGTTTAACTGTCAGAAGCTCCGCCTCC
CCGAGAATTGTGGATATGAATTTCAGATGCAGTATGGATCCATTGGCCTG
GTCAGTTGGTGCCACCCTAGGATATGCTCAGGCTGCTAAAGATAAGCGTG
TGATTGCTTGCATTGGTGATGGAAGTTTCCAGGTAACTGCTCAGGAGATA
TCAACGATGATTCGATGTGGACAAAGGAGCATCATATTCCTTATCAACAA
TGGCGGGTATACAATTGAAGTAGAGATTCATGATGGGCCTTACAATGTGA
TTAAGAACTGGGATTATACTGGCCTGGTAAATGCCATCCACAATGGAGAA
GGAAAATGCTGGACTGCCAAGGTGCGGAGTGAAGATGAACTAACAGAAGC
AATGAAGACAGCTACTGGAGAACAAAAAGATTCTCTATGTTTTATCGAAG
TATTTGTGCACAAGGATGACACCAGCAAAGAGCTGCTGGAGTGGGGATCC
AGGGTTTCTGCAGCCAACAGCCGCCCTCCAAATCCTCAATAGCACTTTGA
AGTGTTGAGGATTTTGAGTTTCTGTTATTTCAACTGCAGTATTCTTGGCC
TATATCCTAAAA
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