BQ623048

Overview
NameBQ623048
Unique NameBQ623048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_ASPTN (Pyruvate decarboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pdcA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.781e-18
Identity = 54/136 (39.71%), Postives = 74/136 (54.41%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD---KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKEL 535
            + +SVGA  G A AAK+   +R +  +GDGS Q+T QEISTMIR     I+F+I N GYTIE  IH  D  YN I+ WD  GL   +   + K    +V++ DELT+            L  +E+ + +DD    L
Sbjct:  423 IGYSVGACQGAALAAKEQNNRRTVLFVGDGSLQLTVQEISTMIRNNLNPIVFVICNQGYTIERFIHGWDEAYNDIQPWDIKGL-PVVFGAKDKYKGYRVKTRDELTKLFANDEFNSVPCLQLVELHMPRDDAPASL 557          

HSP 2 Score: 26.1794 bits (56), Expect = 9.781e-18
Identity = 15/37 (40.54%), Postives = 18/37 (48.65%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   VI ETG + F     R P N     Q+ +GSIG
Sbjct:  388 ERDIVITETGTANFGIWDTRFPANVTAISQVLWGSIG 424          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.272e-17
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + ++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMIR G +  +F++NN GYTIE  IH     YN I+NW +  L+     G       +V +  E  +       +    +  IEV +   D    L++     +A N++
Sbjct:  415 IGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQNWQHLELLPTF--GAKDYEAVRVSTTGEWNKLTTDEKFQDNTRIRLIEVMLPTMDAPSNLVKQAQLTAATNAK 562          

HSP 2 Score: 27.335 bits (59), Expect = 1.272e-17
Identity = 15/40 (37.50%), Postives = 19/40 (47.50%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGLVS 156
            E   VI ETG S F   +   P N     Q+ +GSIG  +
Sbjct:  380 EGDVVITETGTSAFGINQTHFPNNTYGISQVLWGSIGFTT 419          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.794e-17
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD---KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTA-KVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKEL 535
            + +SVGA  G A AAK+   +R I  +GDGS Q+T QEISTMIR     IIF+I N GYTIE  IH  +  YN I+ WDY  L  A   G GK +   +V+++D++ +  +         L  +E+++ ++D    L
Sbjct:  423 IGYSVGACQGAALAAKEQGNRRTILFVGDGSIQLTLQEISTMIRNKLNPIIFVICNEGYTIERYIHGWEASYNDIQQWDYKSLPVAF--GAGKDYKGYRVKTKDDMIKLFENTEFASAPFLQLVELYMPREDAPSAL 557          

HSP 2 Score: 25.0238 bits (53), Expect = 2.794e-17
Identity = 14/37 (37.84%), Postives = 18/37 (48.65%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   VI ETG + F   + R P       Q+ +GSIG
Sbjct:  388 ENDIVITETGTANFGIWETRFPAGVTAISQVLWGSIG 424          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_CANGA (Pyruvate decarboxylase OS=Candida glabrata GN=PDC1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.795e-17
Identity = 54/150 (36.00%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + ++ GA LG A AA++    KRVI  IGDGS Q+T QEISTMIR G +  +F++NN GYTIE  IH     YN I+NWD+  L+     G       +V +  E  +  +     +   +  IEV +   D    L+E     ++ N++
Sbjct:  415 IGFTTGACLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGEKAGYNDIQNWDHLALLPTF--GAKDYENHRVATTGEWDKLTQDKEFNKNSKIRMIEVMLPVMDAPTSLIEQAKLTASINAK 562          

HSP 2 Score: 26.9498 bits (58), Expect = 2.795e-17
Identity = 15/40 (37.50%), Postives = 19/40 (47.50%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGLVS 156
            E   VI ETG S F   +   P N     Q+ +GSIG  +
Sbjct:  380 EGDVVITETGTSAFGINQTPFPNNAYGISQVLWGSIGFTT 419          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_EMENI (Pyruvate decarboxylase OS=Emericella nidulans GN=pdcA PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.630e-17
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD---KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTE 448
            + +SVGA  G A AAK+   +R +  +GDGS Q+T QEISTMIR     IIF+I N GYTIE  IH  D  YN I+ WD  GL  A   G+G+    KV + DELT+
Sbjct:  422 IGYSVGACQGAALAAKEQGNRRTVLWVGDGSLQLTLQEISTMIRNNLNPIIFVICNEGYTIERFIHGWDESYNDIQTWDIKGLPVAF-GGKGRYKGYKVTTRDELTK 527          

HSP 2 Score: 24.6386 bits (52), Expect = 3.630e-17
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   VI ETG + F     R P       Q+ +GSIG
Sbjct:  387 ENDIVITETGTANFGIWDTRFPSGVTAISQVLWGSIG 423          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_ASPOR (Pyruvate decarboxylase OS=Aspergillus oryzae GN=pdcA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.978e-17
Identity = 54/135 (40.00%), Postives = 73/135 (54.07%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD--KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKEL 535
            + +SVGA  G A AAK+  +R +  +GDGSFQ+T QE+STMIR     IIF+I N GYTIE  IH  +  YN I+ WD+  +  A    + K    KV + DEL E            L  +E+ + +DD    L
Sbjct:  423 IGYSVGACQGAALAAKEQGRRTVLFVGDGSFQLTLQEVSTMIRNNLNPIIFVICNEGYTIERYIHGWEAVYNDIQPWDFLNIPVAF-GAKDKYKGYKVTTRDELRELFANEEFASAPCLQLVELHMPRDDCPASL 556          

HSP 2 Score: 24.2534 bits (51), Expect = 7.978e-17
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   VI ETG + F     R P       Q+ +GSIG
Sbjct:  388 EKDVVITETGTANFGIWDTRFPAGVTAISQVLWGSIG 424          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCPA (Alpha-keto-acid decarboxylase OS=Mycobacterium paratuberculosis GN=kdc PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.980e-17
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLE 541
            + +++ A LG A A  D+R +  IGDG+ Q+T QE+ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + NA+  G  +    +V++  EL +A+ TA    +D +  +EV + + +  + L+E
Sbjct:  419 IGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNAL--GVTEHLAFRVQTYGELDDAL-TAAARHQDRMVLVEVVLPRLEIPRLLVE 550          

HSP 2 Score: 27.335 bits (59), Expect = 7.980e-17
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  377 RVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 420          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC4_SCHPO (Putative pyruvate decarboxylase C3G9.11c OS=Schizosaccharomyces pombe GN=SPAC3G9.11c PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-16
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD-----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIK-NWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + WSVGA  G     KD     +R I  +GDGS  +T QEIS  IR G   IIF+INN GYTIE  IH     YN I   WDY  L+     G     +  + SE EL +  K     + D +  +EV +   D  + L+E     ++ N +
Sbjct:  421 IGWSVGAMFGATLGIKDSDAPHRRSILIVGDGSLHLTVQEISATIRNGLTPIIFVINNKGYTIERLIHGLHAVYNDINTEWDYQNLLKGY--GAKNSRSYNIHSEKELLDLFKDEEFGKADVIQLVEVHMPVLDAPRVLIEQAKLTASLNKQ 570          

HSP 2 Score: 26.5646 bits (57), Expect = 2.277e-16
Identity = 16/44 (36.36%), Postives = 21/44 (47.73%), Query Frame = 1
Query:   16 TFRTC*VETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            TF +   E+  V  ETG S F       P+ C    Q+ +GSIG
Sbjct:  379 TFASFLRESDVVTTETGTSNFGILDCIFPKGCQNLSQVLWGSIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCA1 (Alpha-keto-acid decarboxylase OS=Mycobacterium avium (strain 104) GN=kdc PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.961e-16
Identity = 46/135 (34.07%), Postives = 76/135 (56.30%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLE 541
            + +++ A LG A A  D+R +  IGDG+ Q+T QE+ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + N++  G       +V++  EL +A+ TA    +D +  +EV + + +  + L+E
Sbjct:  419 IGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNSL--GVTDHLAFRVQTYGELDDAL-TAAARHQDRMVLVEVVLPRLEIPRLLVE 550          

HSP 2 Score: 27.335 bits (59), Expect = 2.961e-16
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  377 RVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 420          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_HANUV (Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=PDC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.500e-16
Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGP---YNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + +SVGA +G   AA++    KRVI  +GDGS Q+T QEI+ +IR G +  IF++NN GYTIE  IH GP   YN+I+NW    L    + G        V++  E  +       ++  ++  IEVF+ + D    L+   +  +A N++
Sbjct:  415 IGYSVGAMVGATFAAEELDKAKRVILFVGDGSLQLTVQEIACLIRWGLKPYIFVLNNNGYTIEKLIH-GPTAQYNMIQNWKQ--LRYLTNFGATDYEAIPVKTVGEWKKLTADPAFKKNSTIRLIEVFLPEMDAPSSLVAQANLTAAINAK 562          

HSP 2 Score: 26.1794 bits (56), Expect = 6.500e-16
Identity = 14/37 (37.84%), Postives = 19/37 (51.35%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   V+ ETG S F   + R P +     Q+ +GSIG
Sbjct:  380 EGDIVVTETGTSAFGINQTRFPTDAYGISQVLWGSIG 416          
The following BLAST results are available for this feature:
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC_ASPTN9.781e-1839.71Pyruvate decarboxylase OS=Aspergillus terreus (str... [more]
PDC1_KLULA1.272e-1736.00Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
PDC_ASPFU2.794e-1739.42Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]
PDC1_CANGA2.795e-1736.00Pyruvate decarboxylase OS=Candida glabrata GN=PDC1... [more]
PDC_EMENI3.630e-1749.53Pyruvate decarboxylase OS=Emericella nidulans GN=p... [more]
PDC_ASPOR7.978e-1740.00Pyruvate decarboxylase OS=Aspergillus oryzae GN=pd... [more]
KDC_MYCPA7.980e-1734.81Alpha-keto-acid decarboxylase OS=Mycobacterium par... [more]
PDC4_SCHPO2.277e-1636.18Putative pyruvate decarboxylase C3G9.11c OS=Schizo... [more]
KDC_MYCA12.961e-1634.07Alpha-keto-acid decarboxylase OS=Mycobacterium avi... [more]
PDC_HANUV6.500e-1635.10Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00139 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623048 ID=BQ623048; Name=BQ623048; organism=Citrus sinensis; type=EST; length=662bp
ATGTTCTCTTCAAACACATTCAGGACATGCTGAGTGGAGACACCTGCAGT
AATCGCTGAAACTGGAGACTCTTGGTTTAACTGTCAGAAGCTCCGCCTCC
CCGAGAATTGTGGATATGAATTTCAGATGCAGTATGGATCCATTGGCCTG
GTCAGTTGGTGCCACCCTAGGATATGCTCAGGCTGCTAAAGATAAGCGTG
TGATTGCTTGCATTGGTGATGGAAGTTTCCAGGTAACTGCTCAGGAGATA
TCAACGATGATTCGATGTGGACAAAGGAGCATCATATTCCTTATCAACAA
TGGCGGGTATACAATTGAAGTAGAGATTCATGATGGGCCTTACAATGTGA
TTAAGAACTGGGATTATACTGGCCTGGTAAATGCCATCCACAATGGAGAA
GGAAAATGCTGGACTGCCAAGGTGCGGAGTGAAGATGAACTAACAGAAGC
AATGAAGACAGCTACTGGAGAACAAAAAGATTCTCTATGTTTTATCGAAG
TATTTGTGCACAAGGATGACACCAGCAAAGAGCTGCTGGAGTGGGGATCC
AGGGTTTCTGCAGCCAACAGCCGCCCTCCAAATCCTCAATAGCACTTTGA
AGTGTTGAGGATTTTGAGTTTCTGTTATTTCAACTGCAGTATTCTTGGCC
TATATCCTAAAA
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