BQ623056

Overview
NameBQ623056
Unique NameBQ623056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.785e-12
Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 2
Query:   68 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK--------FSTGGLETSA--FALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            P E+      RA +AEF +  +F++    + M   +  +  A+   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y + Q LG++    ++K           GG  T A  +   SG+GA      EI+ TF LVYT + +A D KR
Sbjct:   42 PGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKR 200          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.785e-12
Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 2
Query:   68 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK--------FSTGGLETSA--FALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            P E+      RA +AEF +  +F++    + M   +  +  A+   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++  R++ Y + Q LG++    ++K           GG  T A  +   SG+GA      EI+ TF LVYT + +A D KR
Sbjct:   42 PGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKR 200          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.944e-12
Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            +A  AEF +M+IFV    GS + +      GA  P  +    I+  F L +A  V    +ISGGH+NPAVT        I+  +S+ Y  AQ LG+++   +L   T     GGL  +   +   + A + ++ E+++TF LV+T +A+  D KR
Sbjct:   36 KAVTAEFLAMLIFVLLSLGSTINWG-----GAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVT--TVHGNLSAGHGLLVELIITFQLVFTIFASC-DSKR 182          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12
Identity = 45/156 (28.85%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   71 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPK 538
            A+I  P  L+  V+E  S  + VF   G+   Y    D         +  S+A    + V +    +ISG H+NPAVT    V  H  +++   YW AQ  GS+ A  +LK     +        +G   W+++V EI++TF +++   A A D +
Sbjct:   38 ADIFPPHLLKKVVSEVVSTFLLVFVTCGAAGIYGSDKDR-----ISQLGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHPIAVLGTTTPTG-PHWHSLVIEIIVTFNMMFVTLAVATDTR 187          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            +A  AEF + +IFV  G GS + +    +     P  +V  S+    ++   V    +ISGGH+NPAVT        I+  +S+ Y IAQ LG+++   +L   T     GGL  +   +   + A + ++ E+++TF LV+T +A+  D KR
Sbjct:   36 KAVSAEFLATLIFVLLGVGSTINWGGSEN---PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVT--TVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKR 182          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP2_DASNO (Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSA-SIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 400
            RA +AEF + +IFVF G GS +++          P  L S   IA AF L +   V A  ++SG H+NPAVT    VG H++F+R+  Y  AQLLG+V    +L
Sbjct:    6 RAVLAEFLATLIFVFFGLGSALSW----------PQALPSVLQIALAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 99          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 400
            RA  AEF + +IFVF G GS + + +      + P+ L    IA AF L +   V A  +ISG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFAEFLATLIFVFFGLGSALNWQQ------SLPSVL---QIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 400
            +A  +EF + ++FVF G GS + + +        P+GL  A +A   A+   V    +ISG H+NPAVT    VG H++F+R+I Y  AQLLG+V    LL
Sbjct:    6 KAVFSEFLATLLFVFFGLGSALNWPQ------ALPSGLQIA-MAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALL 99          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.879e-11
Identity = 42/140 (30.00%), Postives = 71/140 (50.71%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKF-----STGGLETSAFALSSGVGAWNAVVFEIVMTFGL 502
            +A  AEF + +IFVF G GS + +             ++  SIA   A+         +SGGH+NPA+T    +G  I+ +R++ Y  AQL+G++    +L +     + G L  +  AL++      A+V E+++TF L
Sbjct:   12 KAVFAEFLATLIFVFFGLGSALKWPSALPT-------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVN--ALNNNTTPGKAMVVELILTFQL 142          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.879e-11
Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            +A  AEF +M+IFV    GS + +    +     P  +V  S+    ++   V    +ISGGH+NPAVT        I+  +S+ Y  AQ LG+++   +L   T     GGL  +   +   + A + ++ E+++TF LV+T +A+  D KR
Sbjct:   36 KAVTAEFLAMLIFVLLSVGSTINWGGSEN---PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVT--TVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKR 182          
The following BLAST results are available for this feature:
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
PIP11_VICFA3.785e-1232.14Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH3.785e-1232.14Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
AQP4_BOVIN4.944e-1232.90Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
NIP21_MAIZE6.457e-1228.85Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
AQP4_MOUSE8.433e-1231.37Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP2_DASNO1.101e-1141.35Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=... [more]
AQP2_TALEU1.438e-1142.72Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_ORYAF1.438e-1139.60Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]
AQP5_RAT1.879e-1130.00Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP4_RAT1.879e-1130.72Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00147 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00147 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623056 ID=BQ623056; Name=BQ623056; organism=Citrus sinensis; type=EST; length=642bp
AGAGCTCGAAGCTAAAACTAAAACTTGCCAAGAAAATTAAAAAATGCCCG
GAATTGCTATCGGAAACCCGGCTGAGATCGGCCAGCCCGATGCCCTTAGG
GCGGCTGTCGCTGAGTTTTTCTCCATGGTCATTTTTGTTTTTGCCGGCCA
AGGGTCTGGCATGGCTTACAGCAAGCTCACGGACAATGGAGCAACAACAC
CAGCAGGTCTAGTGTCAGCATCAATAGCTCATGCATTTGCCCTCTTCGTG
GCAGTTTCTGTTGGCGCCAACATCTCCGGTGGACACGTGAACCCCGCTGT
TACTTTCGGTGCCTTTGTTGGCGGCCACATTACATTTGTCAGGAGTATTT
TGTACTGGATTGCCCAGTTACTCGGATCTGTTGTTGCTTGCTTGCTTCTC
AAGTTCTCCACTGGTGGATTGGAAACATCTGCTTTTGCCCTGTCATCTGG
AGTTGGTGCATGGAATGCAGTTGTGTTTGAGATTGTGATGACCTTTGGAC
TGGTCTACACGGGGTATGCCACAGCTGTTGACCCAAAGAGGGGAAACATT
GGCATCATTGCACCAATTGCAATTGGGTTATTGGTGGGGCCCACATCTTG
GCTGGGGGGGCCTTTGATGGGGCATCGATGACCCCTGAGTTT
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