BQ623056

Overview
NameBQ623056
Unique NameBQ623056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623056_ssr384 microsatellite BQ623056_ssr384:384..395. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 2
Query:   47 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTD---NGATTPA---GLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            P   + + AE+G     RA +AEF + ++F++    + + Y   TD   +GA   A   G+    IA AF   +FV V   A ISGGH+NPAVTFG F+   ++ VR++LY +AQ LG+V    L+K F +   +     A +L+SG      +  EIV TF LVYT + +A DPKR
Sbjct:   25 PPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVF-SATDPKR 200          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 2
Query:   47 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTD---NGATTPAGLVSA-SIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            P   + + AE+G     RA +AEF + ++F++    + + Y   TD   +GA    G V    IA AF   +FV V   A ISGGH+NPAVTFG F+   ++ VR++LY +AQ LG++    L+K F +   +     A +L+SG      +  EI+ TF LVYT + +A DPKR
Sbjct:   25 PPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVF-SATDPKR 198          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 2
Query:   74 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETS--------AFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            E+G+    RA +AEF + ++F++    + + Y   TD  A+       G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+   ++ VR+ILY +AQ LG+V    L+K    G ++S        A  L++G      +  EI+ TF LVYT + +A DPKR
Sbjct:   28 ELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVK----GFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 192          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = 2
Query:   74 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAT----TPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            E+G+    RA +AEF + ++F++    + + Y   TD        T  G++  + A    +F+ V   A ISGGH+NPAVTFG  +   +T VR+++Y +AQ LG++    L+K       T     A  LS G      V  EI+ TF LVYT + +A DPKR
Sbjct:   30 ELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKR 192          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 62/170 (36.47%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   74 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            E+ Q    RA +AEF + ++F++    + + Y   TD  A+ P     G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+   ++ VR++LY IAQ LG++    L+K    G +++ +         LS G      +  EI+ TF LVYT + +A DPKR
Sbjct:   33 ELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK----GFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 197          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.535e-18
Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = 2
Query:   68 PAEIGQPDAL------RAAVAEFFSMVIFVFAGQGSGMAYSKLTDN---GATTPAGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAF--------ALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            PA +  PD L      RAA+AEF + ++F++    + + Y + +D    G T   G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+G  ++ VR++LY IAQ  G++    L K    G + S +         +S G     A+  EI+ TF LVYT + +A DPKR
Sbjct:   24 PAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAK----GFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVF-SATDPKR 195          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.535e-18
Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = 2
Query:   74 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTD---NGATTPAGLVSA-SIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            E+G+    RA +AEF + ++F++    + + Y   TD   NGA    G V    IA AF   +F+ V   A +SGGH+NPAVT G F+   ++ VR++LY  AQ LG++    L+K     L       A  L++G      +  EI+ TF LVYT + +A DPKR
Sbjct:   31 ELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKR 195          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.029e-18
Identity = 60/162 (37.04%), Postives = 89/162 (54.94%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            RA +AEF + ++F++    + + Y   TD  A+ P     G+    IA AF   +F+ V   A ISGGH+NPAVTFG F+   ++ VR++LY IAQ LG++    L+K    G +++ +         LS G      +  EI+ TF LVYT + +A DPKR
Sbjct:   42 RAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK----GFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 198          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 2
Query:   47 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTP----AGLVSASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            P   + +  E+ +    RA +AEF + ++F++    + + Y   TD  A+ P     G+    IA AF   +F+ V   A +SGGH+NPAVTFG F+   ++ VR++LY +AQ LG++    L+K             A  LS+G      +  EI+ TF LVYT + +A DPKR
Sbjct:   20 PPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKR 193          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.343e-17
Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   47 PGIAIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAY-SKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSV----VACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPKR 541
            P   + + +E+G+    RA +AEF + +IF++    + + Y ++     A T  G +  + +    +FV V     +SGGH+NPAVT G F G  ++ VR++LY +AQ LG++    +   ++K     L   A  +S G  A  A+  EIV TF LVYT + +A DPKR
Sbjct:   27 PPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVF-SATDPKR 195          
The following BLAST results are available for this feature:
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
PIP22_MAIZE5.453e-1938.42Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_MAIZE5.453e-1937.71Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP25_ORYSJ1.587e-1837.06Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ARATH1.587e-1835.37Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_MAIZE2.072e-1836.47Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP27_MAIZE3.535e-1837.29Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP24_ORYSJ3.535e-1836.75Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_MAIZE6.029e-1837.04Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP25_MAIZE7.875e-1834.29Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP27_ORYSJ1.343e-1734.12Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00147 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00147 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623056 ID=BQ623056; Name=BQ623056; organism=Citrus sinensis; type=EST; length=642bp
AGAGCTCGAAGCTAAAACTAAAACTTGCCAAGAAAATTAAAAAATGCCCG
GAATTGCTATCGGAAACCCGGCTGAGATCGGCCAGCCCGATGCCCTTAGG
GCGGCTGTCGCTGAGTTTTTCTCCATGGTCATTTTTGTTTTTGCCGGCCA
AGGGTCTGGCATGGCTTACAGCAAGCTCACGGACAATGGAGCAACAACAC
CAGCAGGTCTAGTGTCAGCATCAATAGCTCATGCATTTGCCCTCTTCGTG
GCAGTTTCTGTTGGCGCCAACATCTCCGGTGGACACGTGAACCCCGCTGT
TACTTTCGGTGCCTTTGTTGGCGGCCACATTACATTTGTCAGGAGTATTT
TGTACTGGATTGCCCAGTTACTCGGATCTGTTGTTGCTTGCTTGCTTCTC
AAGTTCTCCACTGGTGGATTGGAAACATCTGCTTTTGCCCTGTCATCTGG
AGTTGGTGCATGGAATGCAGTTGTGTTTGAGATTGTGATGACCTTTGGAC
TGGTCTACACGGGGTATGCCACAGCTGTTGACCCAAAGAGGGGAAACATT
GGCATCATTGCACCAATTGCAATTGGGTTATTGGTGGGGCCCACATCTTG
GCTGGGGGGGCCTTTGATGGGGCATCGATGACCCCTGAGTTT
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