BQ623058

Overview
NameBQ623058
Unique NameBQ623058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.274e-59
Identity = 124/228 (54.39%), Postives = 156/228 (68.42%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 685
            PDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK+IVA GLA +  VQ++YAIGV +P+S+ VD+ GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D TWE        K QA
Sbjct:  176 PDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVAQPVSISVDTLGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLTWERTDKAATLKEQA 397          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59
Identity = 120/216 (55.56%), Postives = 154/216 (71.30%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK+IVA GLA +  VQ++YAIGV +P+S+ VD++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  176 PDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLSWE 385          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_CLOBM (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=metK PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.708e-59
Identity = 115/216 (53.24%), Postives = 150/216 (69.44%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  +Q++YAIGV +P+S+ VD++GTGKI D+EI+ IV + FD RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  171 PDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKITDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59
Identity = 124/216 (57.41%), Postives = 147/216 (68.06%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL EHVIK  IPE +LD +T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLARR  +QVSYAIGV  PLS+ V+++GT  +PD+ ILK V E FD RPG +  +LDL+R     + KTAA GHFGR D D  WE
Sbjct:  181 PDAKSQVTVEYSFGK----PVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTKIFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRR---PIYRKTAAGGHFGRTDIDLPWE 389          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59
Identity = 124/216 (57.41%), Postives = 147/216 (68.06%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL EHVIK  IPE +LD +T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLARR  +QVSYAIGV  PLS+ V+++GT  +PD+ ILK V E FD RPG +  +LDL+R     + KTAA GHFGR D D  WE
Sbjct:  181 PDAKSQVTVEYSFGK----PVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTKIFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRR---PIYRKTAAGGHFGRTDIDLPWE 389          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59
Identity = 113/216 (52.31%), Postives = 153/216 (70.83%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVTVEY  +N    P+R+ T++ISTQH   ++ ++I  +LKEHVI PV+P++ +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK+IVA GLA  C VQ++YAIGV +P+S+ +D++GTGK  ++ ++++V+++FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  176 PDGKTQVTVEYDENNK---PIRIDTIVISTQHHPEISLEQIQRNLKEHVINPVVPKELIDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADSCEVQLAYAIGVAQPVSISIDTFGTGKASEETLIEVVRKNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRLDLDLPWE 385          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 111/216 (51.39%), Postives = 149/216 (68.98%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVT+EY +      P R+ T++IS QHD   T ++I  D+ ++VI  V+    +D++T + +NP+GRFV+GGP GD GLTGRKII+DTY             KDPTKVDRSGAY  R  AK+IVA GLAR+C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E+FD RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  176 PDGKTQVTIEYEDGR----PKRIDTIVISAQHDPDTTQEQIRKDVIDYVILDVVDRNLIDDRTRYFINPTGRFVVGGPQGDTGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 113/216 (52.31%), Postives = 152/216 (70.37%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVTVEY ++     PVR+  V++STQHD  VT ++I  D+ EHVIK V+P ++LD++T +++NP+GRFVIGGPHGD GLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  + ++YAIGV  P+S+ V+++GT KI D +I+ IV + FD RPG +  +L+LKR     + +TAAYGHFGR D +  WE
Sbjct:  171 PDGKTQVTVEYEDNK----PVRIDAVVVSTQHDPEVTQEQIQKDIMEHVIKTVVPNEWLDDETKYYINPTGRFVIGGPHGDTGLTGRKIIVDTYGGSGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKIEIGLAYAIGVARPVSLLVNTFGTEKIEDSKIVDIVNKVFDLRPGAIIRDLELKR---PIYRQTAAYGHFGRTDVELPWE 379          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 114/216 (52.78%), Postives = 150/216 (69.44%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV + FD RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  171 PDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 114/216 (52.78%), Postives = 150/216 (69.44%), Query Frame = 2
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV + FD RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  171 PDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
The following BLAST results are available for this feature:
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACWK1.274e-5954.39S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_BACC21.664e-5955.56S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_CLOBM3.708e-5953.24S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CHLSY6.325e-5957.41S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_CHLAA6.325e-5957.41S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_BACLD6.325e-5952.31S-adenosylmethionine synthetase OS=Bacillus lichen... [more]
METK_SYMTH8.260e-5951.39S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_CLONN8.260e-5952.31S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_CLOBL8.260e-5952.78S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBK8.260e-5952.78S-adenosylmethionine synthetase OS=Clostridium bot... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00149 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00149 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623058 ID=BQ623058; Name=BQ623058; organism=Citrus sinensis; type=EST; length=698bp
GCCCGATGGGAAGACCCAGGTCACTGTTGAGTACTACAATGACAATGGTG
CCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGAT
GAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCAT
TAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACC
TTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGT
CTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCA
TGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTG
GTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTT
GCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCC
ATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGG
AGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATG
ACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGAC
TGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAG
TTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGGTG
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