BQ623067

Overview
NameBQ623067
Unique NameBQ623067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.392e-26
Identity = 54/129 (41.86%), Postives = 85/129 (65.89%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            K ++ VI E+T+GG D   EC G    M  AF    +GWG  V++GV    +  + + +  L  R++ GTFFG  KP++DI ++ +KY++KEL +D+FITH++ F  INKAFD +L+G+ +RC+I M++
Sbjct:  252 KPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITMEE 380          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.453e-26
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            V+ EMT+GG D   EC G  + M   F    +GWG  V++GV         + +  L  +++ GTFFG  KP++D+  + + Y+ KEL L++FITH V F +IN AFDL+L+G+SLRCV+ MD+
Sbjct:  256 VLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMDE 379          

HSP 2 Score: 25.7942 bits (55), Expect = 3.453e-26
Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 3
Query:    3 IIGVDINPEKFEIGDK 50
            IIGVD+NP KFE   K
Sbjct:  222 IIGVDLNPAKFEQAKK 237          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.453e-26
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            V+ EMT+GG D   EC G  + M   F    +GWG  V++GV         + +  L  +++ GTFFG  KP++D+  + + Y+ KEL L++FITH V F +IN AFDL+L+G+SLRCV+ MD+
Sbjct:  256 VLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMDE 379          

HSP 2 Score: 25.7942 bits (55), Expect = 3.453e-26
Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 3
Query:    3 IIGVDINPEKFEIGDK 50
            IIGVD+NP KFE   K
Sbjct:  222 IIGVDLNPAKFEQAKK 237          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 3.454e-26
Identity = 55/125 (44.00%), Postives = 80/125 (64.00%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   G  I+    +++ GR+  GT FGG K    I  L  +Y+ K++ +DEF+TH +SF  IN+AF+L+  GKS+R V+
Sbjct:  248 KPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVV 372          

HSP 2 Score: 22.3274 bits (46), Expect = 3.454e-26
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 IIGVDINPEKF 35
            IIGVDIN +KF
Sbjct:  219 IIGVDINKDKF 229          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 4.050e-26
Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWM 408
            K+++ V+ EMTDGG D+ FECIG   VM  A  ++ +GWG +V++GV   G  IS    +++ GR+  GT FGG K    +  L  +Y+ K++ +DEF+T  +SF  INKAFDL+  G S+R V+ M
Sbjct:  248 KSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 4.050e-26
Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWM 408
            K+++ V+ EMTDGG DY FECIG   VM  A  ++ +GWG +V++GV   G  IS    +++ GR+  GT FGG K    +  L  +Y+ K++ +DEF+T  +SF  IN+AFDL+  G S+R V+ M
Sbjct:  248 KSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 4.495e-26
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1
Query:   52 EMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            ++TDGG DY FECIG  + M  A  ++ +GWG +V++GV   G  IS    +++ GR   G+ FGG +  SD+  L + YL K+L +DEFITHE+    IN+AFDL+ +G+S+R +I
Sbjct:  261 DLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377          

HSP 2 Score: 27.335 bits (59), Expect = 4.495e-26
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 3
Query:    3 IIGVDINPEKFEIGDK 50
            I G+DINP+KFE+  K
Sbjct:  222 IYGIDINPDKFELAKK 237          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.495e-26
Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+ EMTDGG DY FECIG   +M  A  +  +GWG++VI+GV   G  IS    +++ GR   GT FGG K    +  L + Y+ K+L +DEF+TH + F  IN+ F+L+  GKS+R V+
Sbjct:  250 KPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          

HSP 2 Score: 25.0238 bits (53), Expect = 4.495e-26
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:    3 IIGVDINPEKFE 38
            IIG+D+NP KFE
Sbjct:  221 IIGIDLNPAKFE 232          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 5.289e-26
Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            K ++ VI EMTDGG D   EC G    M  AF    +GWG  V++GV         + +  L  R++ GTF+G  KP++D+  + ++Y+  EL L++FITH + F +INKAFD +L+G+S+RC+I M++
Sbjct:  252 KPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRMEE 380          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.908e-26
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            K ++ VI EMT+GG D   EC G    M  AF    +GWG  V++GV         + +  L  R++ GTF+G  KP++D+  + +KY+  EL L++FITH V F +INKAFD +L+G+S+RC+I M++
Sbjct:  252 KPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKMEE 380          
The following BLAST results are available for this feature:
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH_FRAAN1.392e-2641.86Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_ORYSJ3.453e-2642.74Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI3.453e-2642.74Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADHX_HORSE3.454e-2644.00Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_RAT4.050e-2643.31Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE4.050e-2643.31Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_DROME4.495e-2644.44Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHX_SPAAU4.495e-2643.20Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADH1_TRIRP5.289e-2641.09Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_PEA6.908e-2641.86Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00158 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00158 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623067 ID=BQ623067; Name=BQ623067; organism=Citrus sinensis; type=EST; length=476bp
AGATTATAGGTGTTGATATAAATCCTGAAAAATTTGAGATAGGTGATAAA
GGAAATGACAGATGGGGGAGCAGACTATTGCTTCGAGTGCATTGGCTTGG
CGTCCGTAATGAATGATGCTTTCAACAGTAGCCGAGAGGGCTGGGGCAAG
ACGGTGATACTAGGAGTGGAGATGCATGGCTCCCCAATTTCTTTGAATTC
CATCGAGATTCTCAAAGGCAGAAGCGTTTGTGGCACATTTTTCGGAGGGC
TGAAACCCAAATCTGACATTGCTACTCTCGCCCAGAAGTACCTAGACAAG
GAGCTTAATCTGGACGAGTTCATAACACACGAAGTGAGCTTCCACGATAT
TAACAAAGCTTTCGACTTGCTCCTCGAAGGAAAAAGTCTGCGTTGCGTCA
TCTGGATGGATAAATTGATATAGGACAGCAAGTATTCTTCTTATATGGTA
CACTTTATTGAAATAATCAAGTTTGG
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