BQ623067

Overview
NameBQ623067
Unique NameBQ623067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.280e-19
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K +  V+ EMT  G DY FE IG    M  A  S    +G +VI+GV      +S + + +  GR+  G+ FGG K K  +  L   Y++K+  LD  ITH + FH IN+ FDLL  GKS+R V+
Sbjct:  248 KPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMEKKFVLDPLITHTLPFHKINEGFDLLRTGKSIRSVL 372          

HSP 2 Score: 22.3274 bits (46), Expect = 9.280e-19
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 IIGVDINPEKF 35
            IIGVDIN +KF
Sbjct:  219 IIGVDINKDKF 229          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.822e-18
Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            V++EMTDGG D+ FE IG    M  A    +E  G +VI+GV  +   ++++ + +L GRS  G  FGG K K D+  L   ++ K+  L+  IT+   F  IN+ FDLL  GKS+R V+
Sbjct:  254 VLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPFAKINEGFDLLRAGKSIRTVL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.822e-18
Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            V++EMTDGG D+ FE IG    M  A    +E  G +VI+GV  +   ++++ + +L GRS  G  FGG K K D+  L   ++ K+  L+  IT+   F  IN+ FDLL  GKS+R V+
Sbjct:  254 VLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPFAKINEGFDLLRAGKSIRTVL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.040e-18
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   28 KNLR*VIKEMTDG-GADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K +  V+ ++T G G DY FE IG    M  AF S  +  G +V++GV  + S I+ N + +  GR+  G  FGG K K  +  L   ++ K+  LD  ITH + F  IN+ FDLL  GKS+R V+
Sbjct:  248 KPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          

HSP 2 Score: 22.3274 bits (46), Expect = 2.040e-18
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 IIGVDINPEKF 35
            IIGVDIN +KF
Sbjct:  219 IIGVDINKDKF 229          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.380e-18
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K +  V+ EMT  G DY FE IG    M +A  S    +G +VI+GV      IS + + I  GR+  G+ FGG K K  +  L   Y+ K+  LD  ITH + F  IN+ FDLL  GKS+R V+
Sbjct:  249 KPIHEVLTEMTGKGVDYSFEVIGRIETMTEALASCHYNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSKDAVPKLVADYMKKKFVLDPLITHTLPFTKINEGFDLLRTGKSIRTVL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 4.059e-18
Identity = 51/125 (40.80%), Postives = 67/125 (53.60%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K +  V+ EMT  G DY FE IG    M  A  S    +G +VI+GV      IS + + I  GR+  G+ FGG K K  +  L   Y+ K+  LD  ITH + F  IN+ FDLL  GKS+R V+
Sbjct:  250 KPIHEVLTEMTGQGVDYSFEVIGRIETMTAALASCHNNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSKDAVPKLVADYMKKKFVLDPLITHTLPFTKINEGFDLLRTGKSIRSVL 374          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 9.859e-18
Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            V+ +MT     Y FE IG    M DA +S    +G +V++G       ++ + + +  GR+  G  FGG K + D+  L  ++L+K+ +LD+ ITH + F++IN+ F+LL  GKS+R V+
Sbjct:  253 VLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLDQLITHTLPFNNINEGFELLYSGKSIRTVL 372          

HSP 2 Score: 22.7126 bits (47), Expect = 9.859e-18
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:    3 IIGVDINPEKFE 38
            IIG+DIN +KF+
Sbjct:  219 IIGIDINKDKFQ 230          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.181e-17
Identity = 42/125 (33.60%), Postives = 75/125 (60.00%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ VI EMT+GG D+  +C G + VM    + +  GWG    +GV ++   ++++ +E++ GR++ G+ FGG    + +  L   Y + + NL+  +TH + F  IN+A DLL +GKS+R ++
Sbjct:  254 KPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELILGRTLRGSSFGGWDVDT-VPKLVSDYKNGKFNLEALVTHTLPFEKINEALDLLKQGKSIRTIL 377          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.181e-17
Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ VI+E++DGG D+ FE IG    +  A  S     G +VI+GV      +++N + +L GR+  G  FGG K K  +  L   ++ K+ +LD  IT+ + F  IN+ FDLL  GKS+R ++
Sbjct:  249 KPIQEVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFSLDPLITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.282e-17
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   28 KNLR*VIKEMTDG-GADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K +  V+ +MTDG G +Y FE IG    M  A  S    +G +VI+GV    S I+ + + +  GR+  G+ FGG K K  +  L   ++ K+  LD  ITH + F  IN+ F+LL  GKS+R V+
Sbjct:  248 KPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          

HSP 2 Score: 23.0978 bits (48), Expect = 1.282e-17
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 IIGVDINPEKF 35
            IIG+DIN EKF
Sbjct:  219 IIGIDINKEKF 229          
The following BLAST results are available for this feature:
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1_STRCA9.280e-1940.00Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_GEOKN1.822e-1840.00Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH1_GEOBU1.822e-1840.00Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1_NAJNA2.040e-1838.89Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_COTJA2.380e-1840.80Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_CHICK4.059e-1840.80Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH7_MOUSE9.859e-1835.00Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADHQ_RABIT1.181e-1733.60Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH1_RABIT1.181e-1736.80Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1B_UROHA1.282e-1738.10Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00158 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00158 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623067 ID=BQ623067; Name=BQ623067; organism=Citrus sinensis; type=EST; length=476bp
AGATTATAGGTGTTGATATAAATCCTGAAAAATTTGAGATAGGTGATAAA
GGAAATGACAGATGGGGGAGCAGACTATTGCTTCGAGTGCATTGGCTTGG
CGTCCGTAATGAATGATGCTTTCAACAGTAGCCGAGAGGGCTGGGGCAAG
ACGGTGATACTAGGAGTGGAGATGCATGGCTCCCCAATTTCTTTGAATTC
CATCGAGATTCTCAAAGGCAGAAGCGTTTGTGGCACATTTTTCGGAGGGC
TGAAACCCAAATCTGACATTGCTACTCTCGCCCAGAAGTACCTAGACAAG
GAGCTTAATCTGGACGAGTTCATAACACACGAAGTGAGCTTCCACGATAT
TAACAAAGCTTTCGACTTGCTCCTCGAAGGAAAAAGTCTGCGTTGCGTCA
TCTGGATGGATAAATTGATATAGGACAGCAAGTATTCTTCTTATATGGTA
CACTTTATTGAAATAATCAAGTTTGG
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