BQ623074

Overview
NameBQ623074
Unique NameBQ623074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 60/175 (34.29%), Postives = 96/175 (54.86%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 559
            M +Y+D++TGDE+ +D++  K  ++ +++EV GK + +   D+ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_CANAL (Translationally-controlled tumor protein homolog OS=Candida albicans GN=TMA19 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 556
            ML+++D+++GDELLSD++  K  + G ++E +   V  G  D+DIGANPS                V ++V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K      K +L    D +F+ GESM  D  +V   Y+E  T P        +KE K
Sbjct:    1 MLIFEDVISGDELLSDAYDVKLVD-GAVYEADCAMVTVGNGDIDIGANPSAEDGEEALEDGAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFKDWEFYTGESMDPDAMVVLLNYREDGTTPYVAIWKHGVKENK 166          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_BOMMO (Translationally-controlled tumor protein homolog OS=Bombyx mori GN=Tctp PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 556
            M +Y+D++TGDE+ SD++  K  +  +++EV G+ V +   D+ I G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ E+FK N+    K +L +  +LQFF GESM  DG +    Y+  +G   P  ++    L+E K
Sbjct:    1 MKIYKDIITGDEMFSDTYKMKLVDE-VIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDSAVESG--VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 171          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_BOVIN (Translationally-controlled tumor protein OS=Bos taurus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 559
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_PIG (Translationally-controlled tumor protein OS=Sus scrofa GN=TPT1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18
Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 559
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_PANTR (Translationally-controlled tumor protein OS=Pan troglodytes GN=TPT1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18
Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 559
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_HUMAN (Translationally-controlled tumor protein OS=Homo sapiens GN=TPT1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18
Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 559
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_DEBHA (Translationally-controlled tumor protein homolog OS=Debaryomyces hansenii GN=DEHA2E17468g PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18
Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF---LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 517
            M+++ D+++GDELLSD++  K  ++ +++E +   V     DVDIGANPS                V ++V +FRLQ Q +FDKK F+TYMK ++K +   L+E+  E  +    GA  +   ++S   D  F+ GESM  DG +V   Y+E  T P
Sbjct:    1 MIIFTDVISGDELLSDAYDVKLVDD-VVYEADCAMVNVNNGDVDIGANPSAEEGGEDLEDGTET--VNNVVYSFRLQ-QTSFDKKSFMTYMKGYMKRVKAHLAEKNPEAIEAFENGAKTYFKKVVSSFGDWDFYTGESMDPDGMVVLLNYREDGTTP 153          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18
Identity = 57/174 (32.76%), Postives = 90/174 (51.72%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 559
            M++Y+DL++ DE+ SD +  +E   G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QF++GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_LONON (Translationally-controlled tumor protein homolog OS=Lonomia obliqua GN=Tctp PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 556
            M +Y+D++TGDE+ SD++  K  +  +++EV GK V   QG + +D G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ +IFK N+    K +L++  +LQFF GESM  DG +    Y+  +    P  ++    L+E K
Sbjct:    1 MRIYKDIITGDEMFSDTYKVKLVDE-VIYEVTGKLVSRTQGDIQID-GFNPSAEEADEGTDSNVETG--VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKELQFFTGESMDCDGMVAMMEYRKVDETEIPIMMFFKHGLEEEK 171          
The following BLAST results are available for this feature:
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_DROME7.935e-1934.29Translationally-controlled tumor protein homolog O... [more]
TCTP_CANAL1.354e-1835.29Translationally-controlled tumor protein homolog O... [more]
TCTP_BOMMO1.354e-1835.06Translationally-controlled tumor protein homolog O... [more]
TCTP_BOVIN1.768e-1833.33Translationally-controlled tumor protein OS=Bos ta... [more]
TCTP_PIG2.309e-1833.33Translationally-controlled tumor protein OS=Sus sc... [more]
TCTP_PANTR2.309e-1833.33Translationally-controlled tumor protein OS=Pan tr... [more]
TCTP_HUMAN2.309e-1833.33Translationally-controlled tumor protein OS=Homo s... [more]
TCTP_DEBHA3.015e-1836.31Translationally-controlled tumor protein homolog O... [more]
TCTP_RABIT6.718e-1832.76Translationally-controlled tumor protein OS=Orycto... [more]
TCTP_LONON1.146e-1735.43Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00165 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00165 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623074 ID=BQ623074; Name=BQ623074; organism=Citrus sinensis; type=EST; length=680bp
CAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTG
CAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTCC
GACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTGA
GGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATC
CTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTG
AAGGTGGTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTTT
TGACAAGAAGCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGA
CGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAG
GGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGT
TGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGG
AAGGTGCGACCGACCCAACATTTTTGTATATTGCTGATGCATTGAAGGAG
GTGAAGTGCTAAGCCCGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCTAG
TTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGACTGGGTTACT
CGGGACTTGTGCTTGCTGTTTTTAATTTTT
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