BQ623074

Overview
NameBQ623074
Unique NameBQ623074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_ASPFU (Translationally-controlled tumor protein homolog OS=Aspergillus fumigatus GN=AFUA_1G16840 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12
Identity = 53/179 (29.61%), Postives = 87/179 (48.60%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRL-----QEQPAFDKKQFVTYMKRFIKLLTPKLSEE-----RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 556
            M++Y+D+++GDE+LSD+F  KE + G+L+E +  K++ +   D+ + GANPS                V DI D FRL     +E     K  F +++K ++K +  KL E+       + FKK    A K +L+   +    +G SM  D   V   ++E    P        L+E+K
Sbjct:    1 MIIYKDIISGDEVLSDNFKIKEVD-GVLYECDCRKYLKRKNEDIQLEGANPSAEEGDDDAGGDGEEVMVHDIEDQFRLVWLKTEEGMKPSKDAFKSHLKTYMKKVLAKLQEKGVPEAEIDAFKKGAPAAVKKILANYDNYDVLMGHSMDGDAMHVLIDFREDGVTPYATLWKHGLEEMK 178          
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Match: TCTP_EMENI (Translationally-controlled tumor protein homolog OS=Emericella nidulans GN=AN0641 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 54/179 (30.17%), Postives = 83/179 (46.37%), Query Frame = 2
Query:   56 MLVYQDLLTGDELLSDSFPYKETENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFD---------KKQFVTYMKRFIKLLTPK-LSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 556
            M++Y+D+++GDE+LSD++  K T +G+L+E +  K++ +   D ++ GANPS                V DI D FRL    A D         K    TYMK+ +K L  K   +E    FKK    A   +L    +    +GESM  D   +   ++E    P        L+E+K
Sbjct:    1 MIIYKDIISGDEVLSDTYNIK-TVDGVLYECDCRKYLKKTNEDFELEGANPSAEGGDDEGGAEGGEVMVHDIEDQFRLVWLKAEDGAKPPKDAFKGHLKTYMKKVLKALQDKGAPDETINEFKKGAPAAVNKILKNYDNYDVLMGESMDGDAMHILIDFREDGVTPYATLWKHGLEEMK 178          
The following BLAST results are available for this feature:
BLAST of BQ623074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_ASPFU3.229e-1229.61Translationally-controlled tumor protein homolog O... [more]
TCTP_EMENI4.663e-1130.17Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00165 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00165 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623074 ID=BQ623074; Name=BQ623074; organism=Citrus sinensis; type=EST; length=680bp
CAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTG
CAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTCC
GACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTGA
GGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATC
CTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTG
AAGGTGGTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTTT
TGACAAGAAGCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGA
CGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAG
GGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGT
TGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGG
AAGGTGCGACCGACCCAACATTTTTGTATATTGCTGATGCATTGAAGGAG
GTGAAGTGCTAAGCCCGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCTAG
TTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGACTGGGTTACT
CGGGACTTGTGCTTGCTGTTTTTAATTTTT
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