BQ623075

Overview
NameBQ623075
Unique NameBQ623075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1387 contig Csv1_Contig1387:282..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.500e-45
Identity = 92/167 (55.09%), Postives = 108/167 (64.67%), Query Frame = 1
Query:  124 SVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            +VER+K GF  FK E Y+K P  +  L  GQ+PKYMVFAC+DSRVCPS  L  +PGEAF +RN+AN+VP Y + K              LKV  IVVIGHS CGGIK L+S     ++S  F+EDWV+IG PAK K  TE    PF DQCT  EKEAV VSL  LLT
Sbjct:  126 AVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLT 292          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  127 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAK-SKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            ++ I DGF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +              L+VS+IV+ GHS CG +  + S      +    +  W++    A+       H D P   +     +E VI  L+ L T
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS--CQCMDHMPAVSHWLRYADSARVVNEARPHSDLP--SKAAAMVRENVIAQLANLQT 162          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  127 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAK-SKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            ++ I DGF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +              L+VS+IV+ GHS CG +  + S      +    +  W++    A+       H D P   +     +E VI  L+ L T
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS--CQCMDHMPAVSHWLRYADSARVVNEARPHSDLP--SKAAAMVRENVIAQLANLQT 162          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15
Identity = 44/107 (41.12%), Postives = 57/107 (53.27%), Query Frame = 1
Query:  136 IKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMS 456
            I DGF+ F+R+ Y     L+  LA  Q+PK +  ACSDSRV P  +   +PGE FV+RN  NIVP Y                + L V +IVV GHS CG +  + S
Sbjct:    4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAV-LGVGDIVVCGHSDCGAMGAIAS 109          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  100 PSDTKAFDS-VERIKDGFIHFKR----EKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMS 456
            PSD KA    +E+  D      R     K   +P  +++LA GQSP+Y+   CSDSRV  + ++    GE FV RN+AN+VP  D +              HLKV +IVV GH  CGG++  ++
Sbjct:    4 PSDRKAVTRYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTIDLSSMSVINYAVG----HLKVKHIVVCGHYNCGGVQAALT 123          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.254e-14
Identity = 44/166 (26.51%), Postives = 73/166 (43.98%), Query Frame = 1
Query:  127 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            + ++ +G  HF+   Y  +  L+ + AKGQ P+ +   CSDSR+ P+ +     GE FV+RN  N++PP+                  L + ++VV GHS CG +KGL+            + DW++     +   L  +      D       E V+  +  L T
Sbjct:    1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAANGGEGASIEYAIAA-LNIEHVVVCGHSHCGAMKGLLKLN-QLQEDMPLVYDWLQHAQATRRLVLDNYSGYETDDLVEILVAENVLTQIENLKT 164          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14
Identity = 39/127 (30.71%), Postives = 66/127 (51.97%), Query Frame = 1
Query:  127 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVK 507
            ++R+ +G   F+   +  +  L+ +L+ GQ P+ +   CSDSRV P+ +   + G+ FV+RN  NI+PPY                + L+++ I+V GHS CG +KGL+            + DW+K
Sbjct:    1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKLN-SLQEKLPLVYDWLK 125          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13
Identity = 39/131 (29.77%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  145 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXL-HLKVSNIVVIGHSACGGIKGLMSFPFDGNNS-TDFIEDWVKIGIPAKSK 531
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   QPGE +V+RN+ N++PP    K            + H+ V N+++ GHS CG    +     +   + T +I +W++   P K +
Sbjct:    6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEE 136          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CYNT_HELPY (Carbonic anhydrase OS=Helicobacter pylori GN=cynT PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11
Identity = 39/132 (29.55%), Postives = 63/132 (47.73%), Query Frame = 1
Query:  145 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXL-HLKVSNIVVIGHSACGGIKGLMSFPFDGNN--STDFIEDWVKIGIPAKSK 531
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   +PGE +V+ N+ N+ PP    K            + H+ V N+++ GHS CG   G +    D      T +I +W++   P K +
Sbjct:    6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGAC-GSVHLIHDETTKAKTPYIANWIQFLEPVKEE 136          
The following BLAST results are available for this feature:
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAHC_HORVU5.500e-4555.09Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_ECOLI1.081e-1632.93Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO571.081e-1632.93Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_PSEAE7.746e-1541.12Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CAN_EMENI1.726e-1437.10Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]
CYNT_SYNE72.254e-1426.51Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CYNT_SYNY32.943e-1430.71Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]
CYNT_HELPJ1.461e-1329.77Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]
CYNT_HELPY1.786e-1129.55Carbonic anhydrase OS=Helicobacter pylori GN=cynT ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00166 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00166 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623075 ID=BQ623075; Name=BQ623075; organism=Citrus sinensis; type=EST; length=625bp
GAAGCCATTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGAAGACTTGAA
ACCTGTTGCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGCTACAGACTC
CATCTGACACCAAAGCATTTGATTCCGTGGAGAGGATCAAAGACGGCTTC
ATTCACTTCAAGAGAGAAAAATACGAGAAAAATCCAGCTCTGTACTCTGA
GCTTGCCAAAGGCCAAAGCCCGAAGTATATGGTATTTGCCTGCTCAGACT
CCAGGGTTTGCCCGTCCCATGTGTTGGATTTTCAACCTGGGGAAGCTTTC
GTGGTTCGCAATGTTGCTAACATTGTTCCACCCTATGACCAGACTAAGTA
TGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATCTCAAGGTTT
CAAACATTGTGGTTATTGGGCACAGCGCCTGTGGCGGCATCAAAGGACTC
ATGTCTTTCCCATTTGATGGAAACAACTCCACCGATTTCATTGAAGACTG
GGTGAAAATTGGCATCCCTGCCAAGTCTAAGGGGTTAACAGAGCATGGTG
ACAAGCCTTTTGGAGACCAATGCACATACTGTGAAAAGGAGGCGGTGATT
GTGTCCCTCAGTACTCTGCTCACGT
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