BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_WIGBR (50S ribosomal protein L27 OS=Wigglesworthia glossinidia brevipalpis GN=rpmA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GST+NGRDS K LGVK FGG++ PGNIIVRQRGT+FHPG VG GKD++LYALK G V F+K K +K++++ PK Sbjct: 2 AHKKAGGSTRNGRDSIGKRLGVKLFGGQKAYPGNIIVRQRGTKFHPGKNVGCGKDYSLYALKSGIVFFKKKK--NKKFINIIPK 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RHISN (50S ribosomal protein L27 OS=Rhizobium sp. (strain NGR234) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGT++H G VG+GKDHT++AL G V F + K +GR +V V PK Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIAGNIIVRQRGTKWHAGANVGLGKDHTIFALTAGNVDF-RTKANGRVYVSVMPK 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_METNO (50S ribosomal protein L27 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK GS++NGRDS + LGVKKFG E VI GNIIVRQRGTR+HPG VGMG+DHTL+AL GRV+F K GR +V V P + Sbjct: 2 AHKKAGGSSRNGRDSDGRRLGVKKFGNEAVIAGNIIVRQRGTRWHPGANVGMGRDHTLFALTAGRVQFAKK--HGRAYVTVVPAQ 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BIFLO (50S ribosomal protein L27 OS=Bifidobacterium longum GN=rpmA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKF 277 A KK A S++NGRDS P+ LGVKKFGGE V+ GNIIVRQRGT FHPG VGMGKDHTL+AL +G VKF Sbjct: 2 AHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKF 69
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BIFLI (50S ribosomal protein L27 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKF 277 A KK A S++NGRDS P+ LGVKKFGGE V+ GNIIVRQRGT FHPG VGMGKDHTL+AL +G VKF Sbjct: 2 AHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKF 69
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BIFLD (50S ribosomal protein L27 OS=Bifidobacterium longum (strain DJO10A) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKF 277 A KK A S++NGRDS P+ LGVKKFGGE V+ GNIIVRQRGT FHPG VGMGKDHTL+AL +G VKF Sbjct: 2 AHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKF 69
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VEREI (50S ribosomal protein L27 OS=Verminephrobacter eiseniae (strain EF01-2) GN=rpmA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.779e-22 Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+NGRDS+PK LGVK FGG+R+ G+IIVRQRGTRFHPG VGMGKDH+L+AL +G+V F + V+V P Sbjct: 2 AQKKGGGSTRNGRDSQPKMLGVKVFGGQRITAGSIIVRQRGTRFHPGSNVGMGKDHSLFALVDGQVSFGIKGALSKPTVNVTP 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SPHAL (50S ribosomal protein L27 OS=Sphingopyxis alaskensis GN=rpmA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.779e-22 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GS++NGRDS + LGVKKFGG+ VI GNIIVRQRGT+ +PG VGMGKDHTL+A +GRV+F KL GRK+V V+ Sbjct: 2 AHKKAGGSSRNGRDSAGRRLGVKKFGGQDVIGGNIIVRQRGTKVYPGVNVGMGKDHTLFATADGRVRFHDGKL-GRKYVSVD 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PECCP (50S ribosomal protein L27 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rpmA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.779e-22 Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK GST+NGRDS + LGVK+FGGE V+ GNIIVRQRGT+FH G VG GKDHTL+AL +G+V+FE RK++ + Sbjct: 2 AHKKAGGSTRNGRDSNAQRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGCGKDHTLFALTDGKVQFEVKGPKNRKYISI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_KLEP7 (50S ribosomal protein L27 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpmA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.779e-22 Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG G+DHTL+AL +G+VKFE RK++ + Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLFALTDGKVKFEVKGPKNRKFISI 82 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |