BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_NEOSM (50S ribosomal protein L27 OS=Neorickettsia sennetsu (strain Miyayama) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.878e-24 Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GS+ NGRDS K LGVKKFG ERVIPG+IIVRQRGT+FHPG VGMG DHT++A+K G V F L GR++VHV Sbjct: 2 ATKKAGGSSSNGRDSIGKRLGVKKFGSERVIPGDIIVRQRGTKFHPGRNVGMGSDHTIFAMKSGSVSFSV-GLRGRRFVHV 81
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SINMW (50S ribosomal protein L27 OS=Sinorhizobium medicae (strain WSM419) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGT++HPG VG+GKDHT++AL G V F K K +GR +V V PK Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGENVIAGNIIVRQRGTKWHPGANVGLGKDHTIFALTAGNVDFRK-KANGRVYVSVMPK 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_MESSB (50S ribosomal protein L27 OS=Mesorhizobium sp. (strain BNC1) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS+ K LGVKKFGGE V+ GNII+RQRGT++HPG VGMGKDHTL+AL+ G V F K K +GR +V V P Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVLAGNIIIRQRGTKWHPGANVGMGKDHTLFALQAGAVSFAK-KANGRTYVSVNP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HAES2 (50S ribosomal protein L27 OS=Haemophilus somnus (strain 2336) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMGKDHTL+A +G+VKFE RK+V V Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSV 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HAES1 (50S ribosomal protein L27 OS=Haemophilus somnus (strain 129Pt) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMGKDHTL+A +G+VKFE RK+V V Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSV 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_ACTPJ (50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMGKDHTL+A +G+VKFE RK+V + Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLFATADGKVKFEVKGEKNRKYVSI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_ACTP7 (50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMGKDHTL+A +G+VKFE RK+V + Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLFATADGKVKFEVKGEKNRKYVSI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_ACTP2 (50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMGKDHTL+A +G+VKFE RK+V + Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLFATADGKVKFEVKGEKNRKYVSI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_THIDA (50S ribosomal protein L27 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.616e-24 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS+ K LGVK+FGG+ V+ GNI+VRQRGT+FHPGD VG+GKDHTL+A +G VKFE + RK V +EP Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKRFGGQVVLAGNILVRQRGTQFHPGDNVGIGKDHTLFAKTDGTVKFEIKGAARRKVVRIEP 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RHIME (50S ribosomal protein L27 OS=Rhizobium meliloti GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.616e-24 Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GS++NGRDS+ K LGVKKFGGE VIPGNIIVRQRGT++H G VG+GKDHT++AL G V F K K +GR +V V PK Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIPGNIIVRQRGTKWHAGANVGLGKDHTIFALTTGNVDFRK-KANGRVYVSVMPK 84 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |