BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_AGRT5 (50S ribosomal protein L27 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 8.640e-24 Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GS++NGRDS+ K LGVKKFGGE VIPGNII+RQRGT++HPG VG+GKDHT++AL G V F + K +GR +V V PK Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIPGNIILRQRGTQWHPGANVGIGKDHTIFALTAGNVNF-RTKANGRVFVSVAPK 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHEDO (50S ribosomal protein L27 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLFALSDGKVKFEVKGPNNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHEAM (50S ribosomal protein L27 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK+V +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLFALTDGKVKFEVKGPNNRKFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PSEU2 (50S ribosomal protein L27 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GST+NGRDS+ K LGVK +GG+ +IPGNIIVRQRGT+FH G VGMGKDHTL+A EG +KF+ GR++V + PK Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKMYGGQAIIPGNIIVRQRGTQFHAGYGVGMGKDHTLFAKVEGVIKFQVKGAFGRRYVSIVPK 85
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PSESM (50S ribosomal protein L27 OS=Pseudomonas syringae pv. tomato GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GST+NGRDS+ K LGVK +GG+ +IPGNIIVRQRGT+FH G VGMGKDHTL+A EG +KF+ GR++V + PK Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKMYGGQAIIPGNIIVRQRGTQFHAGYGVGMGKDHTLFAKVEGVIKFQVKGAFGRRYVSIVPK 85
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PSE14 (50S ribosomal protein L27 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GST+NGRDS+ K LGVK +GG+ +IPGNIIVRQRGT+FH G VGMGKDHTL+A EG +KF+ GR++V + PK Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKMYGGQAIIPGNIIVRQRGTQFHAGYGVGMGKDHTLFAKVEGVIKFQVKGAFGRRYVSIVPK 85
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_NOVAD (50S ribosomal protein L27 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GS++NGRDS + LGVKKFGG+ V+ GNII+RQRGTR +PG VGMGKDHTL+AL EGRV+F KL GRK+V V+ Sbjct: 2 AHKKAGGSSRNGRDSAGRRLGVKKFGGQEVVGGNIIIRQRGTRVYPGANVGMGKDHTLFALAEGRVRFHAGKL-GRKYVSVD 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HAMD5 (50S ribosomal protein L27 OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE+V+ G IIVRQRGT+FHPG VG GKDHTL+AL G+VKFE R +V +E Sbjct: 2 AHKKAGGSTRNGRDSEGKRLGVKRFGGEKVLAGTIIVRQRGTKFHPGVNVGCGKDHTLFALSHGKVKFEVKGTKNRSFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HAEIG (50S ribosomal protein L27 OS=Haemophilus influenzae (strain PittGG) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMG+DHTL+A +G+VKFE RK+V + Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGRDHTLFATADGKVKFEVKGEKSRKYVSI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HAEIE (50S ribosomal protein L27 OS=Haemophilus influenzae (strain PittEE) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMG+DHTL+A +G+VKFE RK+V + Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGRDHTLFATADGKVKFEVKGEKSRKYVSI 82 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |