BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RK27_EMIHU (50S ribosomal protein L27, chloroplastic OS=Emiliania huxleyi GN=rpl27 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.686e-19 Identity = 48/72 (66.67%), Postives = 54/72 (75.00%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHK 289 A KK AGSTKNGRDS K LGVK +G + V G II+RQRG F PG VG+GKD+TL+ALKEG VKFEK K Sbjct: 2 AHKKGAGSTKNGRDSNSKRLGVKVYGNQAVKAGGIIIRQRGLTFKPGSNVGVGKDYTLFALKEGLVKFEKMK 73
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_TRIEI (50S ribosomal protein L27 OS=Trichodesmium erythraeum (strain IMS101) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+NGRDS + LGVK++GG+ V GNI+VRQRG++FH G+ VG+GKD+TL+AL EG V FE+ K RK V V P Sbjct: 2 AHKKGTGSTRNGRDSNSQRLGVKRYGGQVVKAGNILVRQRGSKFHAGNNVGVGKDYTLFALVEGMVTFER-KGKSRKKVSVYP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_STRAW (50S ribosomal protein L27 OS=Streptomyces avermitilis GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK A ST+NGRDS + LGVK+FGG+ V G I+VRQRGT FHPG VG GKD TL+AL G V+F H+ GRK V++ P Sbjct: 2 AHKKGASSTRNGRDSNAQRLGVKRFGGQVVNAGEILVRQRGTHFHPGSGVGRGKDDTLFALDAGAVEFGTHR--GRKVVNIVP 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SALAI (50S ribosomal protein L27 OS=Salinispora arenicola (strain CNS-205) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK A S++NGR+S + LGVK+FGG+RV G II+RQRGT+FHPGD VG G+D TL+AL G V+F + GRK V + P++ Sbjct: 2 AHKKGASSSRNGRESAAQRLGVKRFGGQRVNAGEIIIRQRGTKFHPGDLVGRGRDDTLFALAAGSVQFGTKR--GRKTVSIVPQQ 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RALEJ (50S ribosomal protein L27 OS=Ralstonia eutropha (strain JMP134) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+NGRDS+ K LGVK FGG+ + G II+RQRGTR H GD VG+GKDHTL+AL +G V+F + ++ V V P Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGQAINAGGIIIRQRGTRVHAGDNVGVGKDHTLFALVDGHVQFAVKGPAKKQHVSVVP 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RALEH (50S ribosomal protein L27 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+NGRDS+ K LGVK FGG+ + G II+RQRGTR H GD VG+GKDHTL+AL +G V+F + ++ V V P Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGQAINAGGIIIRQRGTRVHAGDNVGVGKDHTLFALVDGHVQFAVKGPAKKQQVSVVP 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_POLNS (50S ribosomal protein L27 OS=Polynucleobacter necessarius (strain STIR1) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKF 277 A KK GST+NGRDS+ K LGVK FGGE + G+II+RQRGTR HPG VG+GKDHTL+AL +G+V+F Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGEYINAGSIIIRQRGTRVHPGANVGIGKDHTLFALIDGQVEF 69
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PARDP (50S ribosomal protein L27 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS + LGVK +GG+ + GNIIVRQRGT + PG VGMG+DHTL+AL +G V F+K L GR ++ V P Sbjct: 2 AHKKAGGSSRNGRDSAGRRLGVKLYGGQLAVAGNIIVRQRGTTWWPGQNVGMGRDHTLFALTDGHVTFKK-GLKGRTYISVLP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_NITEC (50S ribosomal protein L27 OS=Nitrosomonas eutropha (strain C91) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS K LGVK++GGE + G IIVRQRGT+FHPGD VG+G+DHTL+A +G++ F R+ V V P Sbjct: 2 AHKKAGGSSRNGRDSHSKRLGVKRYGGEVIRAGGIIVRQRGTQFHPGDNVGIGRDHTLFAKVDGKIVFTIRGRLNRRTVAVIP 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_JANMA (50S ribosomal protein L27 OS=Janthinobacterium sp. (strain Marseille) GN=rpmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK G+T+NGRDS+ K LGVK +GG+ + G IIVRQRGT+ HPG+ VG+GKDHTL+AL +G+V F R +V V P Sbjct: 2 AHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTKMHPGENVGIGKDHTLFALTDGKVAFVTKGALQRHYVTVVP 84 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |