BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_FRASC (50S ribosomal protein L27 OS=Frankia sp. (strain CcI3) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 48/81 (59.26%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK A S++NGRDS + LGVK+FGG+ V G IIVRQRGT FHPGD VG GKD TL+AL G V+F + GR+ V+V Sbjct: 2 AHKKGASSSRNGRDSNAQRLGVKRFGGQYVKAGEIIVRQRGTHFHPGDLVGRGKDDTLFALSPGHVRFGHRR--GRRVVNV 80
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_CORA7 (50S ribosomal protein L27 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK A S+ NGRDS+ K LGVK+FGG++V G IIVRQRGT+FHPG+ VG G D TL+AL G V+F + GR+ V++ P E Sbjct: 2 AHKKGASSSSNGRDSESKRLGVKRFGGQQVKAGEIIVRQRGTKFHPGENVGRGGDDTLFALAAGSVEFGVKR--GRRLVNIVPAE 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_CLOD6 (50S ribosomal protein L27 OS=Clostridium difficile (strain 630) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 50 LSLMFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 L++ + A+KK GS+KNGRDS K LGVK+F G+ V G+IIVRQRGT+ HPG VG G D TL+AL +G VKFE+ K RK V + P Sbjct: 2 LNMNLQLLASKKGVGSSKNGRDSISKRLGVKRFDGQLVTAGSIIVRQRGTKIHPGTNVGKGSDDTLFALVDGTVKFER-KDKKRKKVSIYP 91
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BACV8 (50S ribosomal protein L27 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS+KNGR+S K LGVK FGG+ GNIIVRQRGT FHPG+ +GMG+DHTL+AL +G V F+ + + R+ V V P Sbjct: 2 AHKKGVGSSKNGRESASKRLGVKIFGGQACKAGNIIVRQRGTEFHPGENIGMGRDHTLFALVDGTVCFKVGR-NDRRSVSVVP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RK27_GRATL (50S ribosomal protein L27, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl27 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHK 289 A KK +GSTKNGRDS+ + LG+KK+GGE VI GNII+RQRG++F PG V +GKD TL+AL G+V F+K K Sbjct: 2 AHKKGSGSTKNGRDSRSQRLGIKKYGGESVIIGNIIIRQRGSQFKPGVNVKLGKDDTLFALANGKVIFKKKK 73
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_STRGR (50S ribosomal protein L27 OS=Streptomyces griseus GN=rpmA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.093e-18 Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK A ST+NGRDS + LGVK+FGG+ V G I+VRQRGT FHPG VG G D TL+AL G V+F H+ GRK V++ P Sbjct: 2 AHKKGASSTRNGRDSNAQRLGVKRFGGQAVNAGEILVRQRGTHFHPGTGVGRGGDDTLFALAAGAVQFGTHR--GRKVVNIVP 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_STRGG (50S ribosomal protein L27 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=rpmA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.093e-18 Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK A ST+NGRDS + LGVK+FGG+ V G I+VRQRGT FHPG VG G D TL+AL G V+F H+ GRK V++ P Sbjct: 2 AHKKGASSTRNGRDSNAQRLGVKRFGGQAVNAGEILVRQRGTHFHPGTGVGRGGDDTLFALAAGAVQFGTHR--GRKVVNIVP 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SALTO (50S ribosomal protein L27 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rpmA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.093e-18 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK A S++NGRDS + LGVK+FGG+ V G II+RQRGT+FHPGD VG G D TL+AL G V+F + GRK V + P++ Sbjct: 2 AHKKGASSSRNGRDSAAQRLGVKRFGGQLVSAGEIIIRQRGTKFHPGDLVGRGGDDTLFALAAGSVQFGTKR--GRKTVSIVPQQ 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RUTMC (50S ribosomal protein L27 OS=Ruthia magnifica subsp. Calyptogena magnifica GN=rpmA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.093e-18 Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST NGRDS K LGVK+FGG+ V+ GNI+VRQRGT+FHPG V GKD TL+A +G+V F K ++V +E Sbjct: 2 AHKKAGGSTNNGRDSVSKRLGVKRFGGQVVLSGNILVRQRGTKFHPGTNVRKGKDDTLFATMDGKVIFAKKGKFMHQYVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_MICAN (50S ribosomal protein L27 OS=Microcystis aeruginosa (strain NIES-843) GN=rpmA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.093e-18 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK GST+NGRDS+ + LGVK++GG+ V GNI++RQRGT+ HPG VG G D TL+AL +G VKFE +K R+ V V P E Sbjct: 2 AHKKGTGSTRNGRDSRSQRLGVKRYGGQVVKAGNILIRQRGTKVHPGKNVGRGGDDTLFALIDGVVKFE-YKDKSRRQVSVYPAE 85 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |