BQ623078

Overview
NameBQ623078
Unique NameBQ623078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7145 contig Csv1_Contig7145:71..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.712e-38
Identity = 96/219 (43.84%), Postives = 114/219 (52.05%), Query Frame = 3
Query:   63 KMDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAE--------TAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            +++ K TEL LGLPG    +K   A      +P+AS++                S  S V   +N   P                 KAQVVGWPP+RSYRKN + +           +VKV M GAPYLRK+DLK YKSY EL  AL  MF     G Y  +            +  N S+Y PTYEDKDGDWMLVGDVPW MFV SCKR+RIMKGSEA
Sbjct:   11 ELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDEESI-------------SNGSDVTKEDNVVPPA----------------KAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCI-FGEYSER------------EGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEA 187          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 97/225 (43.11%), Postives = 127/225 (56.44%), Query Frame = 3
Query:   87 LCLGLPGGGNNKKDEAAA-LELTPTP----KASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAETAA---------------FVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYG--SQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            L LGLPG  + +++  AA L L P P    KA++KR F +++    +    S   +       K  P+         A P A KAQVVGWPPVR+YRKN +A +A+               +VKV MDGAPYLRKVDLK Y SY++LS AL KMFS F  G  G       D +      D L   +YV TYEDKD DWMLVGD+PW++F   C++++IM+GS+A
Sbjct:   44 LRLGLPGSESPEREVVAAGLTLGPLPPTTTKAASKRAFPDSSP---RHGASSGSVAAAAACQDKAAPA---------AAPPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDA 256          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 95/211 (45.02%), Postives = 118/211 (55.92%), Query Frame = 3
Query:   63 KMDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAETAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            +++ K+TELCLGLPG     K+E    +     K++NKR F ET                  +E    PP+               K Q+VGWPPVRS RKN    + ++VKV MDGAPYLRK+DLKTYK+Y EL  AL  MF    +G Y  +            +    S +VPTYEDKDGDWMLVGDVPW+MF  SCKR+RIMKGS+A
Sbjct:    8 ELNLKDTELCLGLPGRTEKIKEE----QEVSCVKSNNKRLFEETR-----------------DEEESTPPT---------------KTQIVGWPPVRSSRKN--NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMF-KVMIGEYCER------------EGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDA 167          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 96/213 (45.07%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAE---TAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            ++ K TEL LGLPG    + +       T     +NKR   ET+           + SV +++      S+++ H +  + P   KA++VGWPP+RSYRKN++ E      FVKV MDGAPYLRKVDLK Y  Y EL  AL  MF    +G Y  +            +    S+Y PTYEDKDGDWMLVGDVPW+MFV SCKR+RIMKGSEA
Sbjct:   11 LNLKATELRLGLPGTEEKEDNNLR----THAVLRNNKRQVRETS-----------QDSVSISK-----ASHHQQHVETVSAPPP-KAKIVGWPPIRSYRKNSVQEGEGDGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK-LAIGEYSER------------EGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEA 189          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.791e-37
Identity = 96/225 (42.67%), Postives = 128/225 (56.89%), Query Frame = 3
Query:   87 LCLGLPGGGNNKKDEAAA-LELTPTP----KASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAETAA---------------FVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYG--SQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            L LGLPG  + +++  AA L L P P    KA++KR F +++      +     ++    +  K  P+         A P A KAQVVGWPPVR+YRKN +A +A+               +VKV MDGAPYLRKVDLK Y SY++LS AL KMFS F  G  G       D +      D L   +YV TYEDKD DWMLVGD+PW++F   C++++IM+GS+A
Sbjct:   44 LRLGLPGSESPEREVVAAGLTLGPLPPTTTKAASKRAFPDSSPRHGASSGSVAAAAAACQD--KAAPA---------AAPPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDA 257          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.054e-37
Identity = 81/165 (49.09%), Postives = 103/165 (62.42%), Query Frame = 3
Query:  204 DLKLNLQSKESSVDLNENFKNPPSNNKNHDK-DPAKPSANKAQVVGWPPVRSYRKNAMAETAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            +L+L L   +    L  +     +  KN+D  + + P   K Q+VGWPPVRS RKN   +  ++VKV MDGAPYLRK+DLK YK+Y EL  AL  MF  FT+G Y  +            +    S +VPTYEDKDGDWMLVGDVPW+MF  SC+++RIMKGSEA
Sbjct:   13 ELRLGLPGAQEEQQLELSCVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMF-KFTVGEYSER------------EGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37
Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 3
Query:  291 DKDPAKPSANKAQVVGWPPVRSYRKNAMAETAA---FVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSF--TMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            D   AKP + KA+ VGWPPVR+YR+NA+ E +A    VKV +DGAPYLRKVDL  +  Y  L  AL  MF+S     G  G  G       +KL+DL+  ++YVPTYEDKDGDWMLVGDVPW+MFV+SCKR+R+MK SEA+
Sbjct:   49 DHADAKPPSPKARAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDG-----EGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAV 184          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.804e-37
Identity = 96/219 (43.84%), Postives = 117/219 (53.42%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAET---------AAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            ++ KETEL LGLPG  N       A E       +NKR        +++ + +  E+S         PP                KAQ+VGWPPVRSYRKN +              +VKV MDGAPYLRK+DL  YK Y EL  AL  MF  F++G Y  +            D    SD+VPTYEDKDGDWML+GDVPWEMF+ +CKR+RIMKGSEA
Sbjct:    5 VNLKETELRLGLPGTDN----VCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETS---------PP---------------RKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFER------------DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEA 182          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36
Identity = 87/174 (50.00%), Postives = 106/174 (60.92%), Query Frame = 3
Query:  204 DLKLNLQSKESSVDLNENFKN--PPSNNKNHDKDPAKPSAN--KAQVVGWPPVRSYRKNAMAETAA-------FVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSE 692
            +L+L L   E +V   ++ K   P +  K  +      +A+  KAQ+VGWPPVRSYRKN +    +       +VKV MDGAPYLRK+DL  YK Y EL  +L  MF  F++G Y       F  E         SD+VPTYEDKDGDWMLVGDVPWEMFV SCKR+RIMKGSE
Sbjct:   17 ELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEY-------FEREG-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSE 177          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 94/224 (41.96%), Postives = 128/224 (57.14%), Query Frame = 3
Query:   48 EAIGLKMDFKETELCLGLPGGGN-----NKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRK-NAMAETAA--FVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEA 695
            E +GL++    TEL LGLP   +     NKK+E              KR F E                  +++   +  S++   D+   K   NK+QVVGWPPV SYRK N+M E A+  +VKV MDGAP+LRK+DL  +K Y +L+ AL K+F        G  GM++ +  +      ++S++VP YEDKDGDWMLVGDVPWEMF++SCKR+RIMK S+A
Sbjct:    4 EGLGLEI----TELRLGLPDAEHQVSVVNKKNE-------------KKRAFSE------------------IDDGVGDENSSSGGGDR---KMETNKSQVVGWPPVCSYRKKNSMNEGASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLF--------GCYGMVEALKNA------DNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDA 175          
The following BLAST results are available for this feature:
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
AX22D_PHAAU4.712e-3843.84Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
IAA5_ORYSJ8.038e-3843.11Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA2_ARATH8.038e-3845.02Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
AX22B_PHAAU8.038e-3845.07Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA5_ORYSI1.791e-3742.67Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA1_ARATH3.054e-3749.09Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA23_ORYSJ5.210e-3756.74Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
IAA3_ARATH6.804e-3743.84Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
IAA4_ARATH2.586e-3650.00Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]
AUX22_SOYBN2.049e-3341.96Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00169 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00169 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623078 ID=BQ623078; Name=BQ623078; organism=Citrus sinensis; type=EST; length=698bp
TGCCGGAAAAAGAAAATCTGTAAAGGAGTTGTTTGATAATTTGAATGGAA
GCTATTGGCCTGAAAATGGACTTCAAAGAGACTGAACTTTGCCTTGGATT
GCCCGGCGGTGGCAACAACAAAAAAGATGAAGCTGCTGCGTTAGAATTAA
CTCCAACTCCAAAGGCTAGCAACAAAAGAGGCTTCTGTGAGACTGCCGTA
ATTGATTTGAAACTCAATCTTCAGTCTAAGGAATCGTCAGTGGATCTGAA
TGAAAATTTCAAGAATCCTCCTTCCAACAACAAGAATCATGATAAGGATC
CCGCAAAGCCATCCGCCAATAAGGCACAAGTTGTGGGGTGGCCACCAGTG
CGATCCTATAGGAAGAATGCTATGGCTGAAACGGCAGCATTTGTGAAGGT
TTGCATGGACGGGGCTCCATATCTTCGCAAAGTGGATTTGAAGACGTATA
AGAGTTACCAAGAGCTTTCTGATGCATTGGCCAAGATGTTCAGTTCCTTC
ACCATGGGTAATTATGGATCACAAGGAATGATTGATTTTATGAACGAGAG
CAAGTTGATGGATCTTTTAAACAGCTCTGATTATGTGCCAACCTATGAAG
ACAAGGATGGCGACTGGATGCTCGTGGGTGATGTTCCTTGGGAGATGTTT
GTTGATTCATGCAAGCGTATGCGCATAATGAAAGGGTCAGAAGCATTG
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