BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ENTFA (V-type ATP synthase alpha chain OS=Enterococcus faecalis GN=atpA PE=3 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 4.407e-79
Identity = 147/239 (61.51%), Postives = 182/239 (76.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +RLA +YERAG+V  LG   R GS+T + AVSP GGD S+PVT  TL +V+VFWGLD +LAQ++HFPS+NWL SYS YST +  + + +   ++  +  +   +LQ E  L EIV+LVG D+L++ D++TLETAK LREDYL QNAF   D F    K   M++
Sbjct:  285 LMNRTILIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLAEYYERAGQVIALGKDHREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSQLAQKRHFPSINWLQSYSLYSTEVGQYLDLELQGNWAAMVAEGMRILQEESQLEEIVRLVGIDSLSDKDRLTLETAKSLREDYLQQNAFDDVDTFTSRTKQAKMLQ 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THEAC (V-type ATP synthase alpha chain OS=Thermoplasma acidophilum GN=atpA PE=2 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 9.817e-79
Identity = 139/239 (58.16%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYL  R++ FYER+G+ + +   ER GS+T++GAVSPPGGD S+PV+  TL + +VFW LD  LA R+HFPS+NWL SYS Y+  L S+Y++    ++  +R +A E+LQRE +L E+ QLVG DA+ E +K  L+ A+++RED+L Q+AF   D +C   K   M++
Sbjct:  456 LMDRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRVSEFYERSGRARLVSPDERYGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDAALANRRHFPSINWLNSYSLYTEDLRSWYDKNVSSEWSALRERAMEILQRESELQEVAQLVGYDAMPEKEKSILDVARIIREDFLQQSAFDEIDAYCSLKKQYLMLK 694          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METLZ (V-type ATP synthase alpha chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpA PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.282e-78
Identity = 144/239 (60.25%), Postives = 186/239 (77.82%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREAS+YTGIT+AEYFRDMGY+V++MADSTSRWAEA+REI  RL EMP + GYPAYL++RL+ FYERAG V+ L G   +GSV+++GAVSP GGDFS+PVT  TL IV+VFW LD  L++R+HFP++NWL SYS Y   L  +Y E+  PD+  +R+   EVLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QN F P D +C   K + M +
Sbjct:  285 LMERTILIANTSNMPVAAREASVYTGITLAEYFRDMGYDVALMADSTSRWAEAMREICSRLEEMPGEEGYPAYLSSRLSEFYERAGLVEPLAG--GSGSVSVIGAVSPAGGDFSEPVTQNTLRIVKVFWALDANLSRRRHFPAINWLQSYSLYMAQLNDYYDEKVSPDWNKLRSWFMEVLQKEAELQEIVQLVGSDALPETEQITIEVARMMRELFLQQNGFDPVDTYCDLPKQLDMFK 521          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HALOH (V-type ATP synthase alpha chain OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=atpA PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.282e-78
Identity = 145/239 (60.67%), Postives = 184/239 (76.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAE++RDMGYNV++MADSTSRWAEALREISGRL EMPA+ G+PAYL +RLA FYERAG VK L G +R GS++++GAVSPPGGDFS+PVT  T   V+ FW LDK LA  +HFP+VNWL SYS+Y   L  +  E  + D+I +R  A E+L+ ED L EIV+LVG+D L +  ++ LE A+L++  +L QNAF+  D+F    K  WM++
Sbjct:  287 MMERTVLIANTSNMPVAAREASIYTGITIAEFYRDMGYNVALMADSTSRWAEALREISGRLEEMPAEEGFPAYLPSRLAEFYERAGYVKTL-GQDREGSISLIGAVSPPGGDFSEPVTQNTKRYVRCFWALDKSLASARHFPAVNWLESYSEYLEDLSGWLKENINEDWIKLRNMAMELLKEEDRLQEIVKLVGEDVLPDNQRLILEVARLIKIGFLQQNAFSKVDRFATPEKQYWMLK 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THEVO (V-type ATP synthase alpha chain OS=Thermoplasma volcanium GN=atpA PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.675e-78
Identity = 138/239 (57.74%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYL  R++ FYER+G+ + +   +R GS+T++GAVSPPGGD S+PV+  TL + +VFW LD  LA R+HFPS+NWL SYS Y+  L  +Y E    D+ ++R++A ++LQRE +L E+ QLVG DA+ E +K  L+ A+++RED+L Q+AF   D +C   K   M++
Sbjct:  468 LMDRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRISEFYERSGRARLVSPEDRFGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDASLANRRHFPSINWLNSYSLYTEDLRHWYDENVAKDWGSLRSQAMDILQRESELQEVAQLVGYDAMPEKEKSILDVARIIREDFLQQSAFDEIDSYCSLRKQYLMLK 706          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METM7 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpA PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.675e-78
Identity = 143/239 (59.83%), Postives = 184/239 (76.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G  V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG   + G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++
Sbjct:  285 LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METM6 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpA PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.675e-78
Identity = 143/239 (59.83%), Postives = 184/239 (76.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G  V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG   + G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++
Sbjct:  285 LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THET2 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpA PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.856e-78
Identity = 147/239 (61.51%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIY G+TIAEYFRD G++V++MADSTSRWAEALREIS RL EMPA+ GYP YLAARLA+FYERAGKV  LGG E  G+VTIVGAVSPPGGD S+PVT +TL IV  FW LD  LA R+HFP++NW  SYS +++AL+ +Y E    D+  +R    E+LQRE  L EIVQLVG DAL + +++ +E  +++RED+L QNAF   D +C   K+  +M+
Sbjct:  281 LMHRTVLIANTSNMPVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYLAARLAAFYERAGKVITLGGEE--GAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEVDAYCSMRKAYGIMK 517          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METMP (V-type ATP synthase alpha chain OS=Methanococcus maripaludis GN=atpA PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.856e-78
Identity = 143/239 (59.83%), Postives = 184/239 (76.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G  V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG   + G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++
Sbjct:  285 LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA3_METHJ (V-type ATP synthase alpha chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA3 PE=3 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.731e-78
Identity = 140/236 (59.32%), Postives = 183/236 (77.54%), Query Frame = 2
Query:   11 RTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            R  L+ANTSNMPVAAREAS+YTGITIAEY+RDMGY+V++MADSTSRWAEA+REISGRL EMP + GYPAYL++RLA FYERAG+V  LG  +  GS++++GAVSPPGGDFS+PVT  TL IV+VFW LD  LA ++HFP++NWL+SYS YS     ++E+   P+FI ++ +  E+LQRE++L EI++LVG + L E D++ L  A++LRE YL Q AF  +D F    K   M++
Sbjct:  290 RMVLIANTSNMPVAAREASVYTGITIAEYYRDMGYHVALMADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSRLADFYERAGRVSLLGSGDHEGSISVIGAVSPPGGDFSEPVTQNTLRIVKVFWALDADLAYQRHFPAINWLMSYSLYSPIAGIWWEEHIGPEFIRMKQEMMEILQRENELEEIIRLVGPETLPESDRLLLLKAEILRESYLMQYAFDEFDTFTGPKKQYRMLK 525          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_ENTFA4.407e-7961.51V-type ATP synthase alpha chain OS=Enterococcus fa... [more]
VATA_THEAC9.817e-7958.16V-type ATP synthase alpha chain OS=Thermoplasma ac... [more]
VATA_METLZ1.282e-7860.25V-type ATP synthase alpha chain OS=Methanocorpuscu... [more]
VATA_HALOH1.282e-7860.67V-type ATP synthase alpha chain OS=Halothermothrix... [more]
VATA_THEVO1.675e-7857.74V-type ATP synthase alpha chain OS=Thermoplasma vo... [more]
VATA_METM71.675e-7859.83V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_METM61.675e-7859.83V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_THET22.856e-7861.51V-type ATP synthase alpha chain OS=Thermus thermop... [more]
VATA_METMP2.856e-7859.83V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA3_METHJ3.731e-7859.32V-type ATP synthase alpha chain 3 OS=Methanospiril... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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