BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METM5 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpA PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.872e-78
Identity = 143/239 (59.83%), Postives = 184/239 (76.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G  V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG  ++ G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  ++ E    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++
Sbjct:  285 LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVQCLGSEDKHGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQENTAADWRSLRDEAMTLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THET8 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpA PE=1 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 6.363e-78
Identity = 146/239 (61.09%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIY G+TIAEYFRD G++V++MADSTSRWAEALREIS RL EMPA+ GYP YLAARLA+FYERAGKV  LGG E  G+VTIVGAVSPPGGD S+PVT +TL IV  FW LD  LA R+HFP++NW  SYS +++AL+ +Y E    D+  +R    E+LQRE  L EIVQLVG DAL + +++ +E  +++RED+L QNA+   D +C   K+  +M+
Sbjct:  281 LMHRTVLIANTSNMPVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYLAARLAAFYERAGKVITLGGEE--GAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMK 517          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METTP (V-type ATP synthase alpha chain OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=atpA PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.085e-77
Identity = 143/239 (59.83%), Postives = 182/239 (76.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++R+ + ANTSNMPVAAREASIYTG+T AEY+RDMGY+V M ADSTSRWAEA+RE++ RL EMP + GYPAYLAARLA FYERAG+ + L G E  GSV +VGAVSPPGGDF++PVT  TL IV+VFW LD +L QR+HFPS+NWL SYS Y   LES+Y E   PD+  ++ +A  +LQ   +L EIV LVG DAL E  ++TLE A+++   +LAQ+AF P D FCP+ K   +++
Sbjct:  281 LLERSIVYANTSNMPVAAREASIYTGMTTAEYYRDMGYDVLMTADSTSRWAEAMRELASRLEEMPGEEGYPAYLAARLADFYERAGRAEVLAGGE--GSVAVVGAVSPPGGDFTEPVTQNTLRIVKVFWALDSRLTQRRHFPSINWLDSYSLYEKDLESWYAENVAPDWNQLKRRAMAILQENAELEEIVMLVGSDALPEDQQLTLEVARMIINFWLAQSAFHPVDTFCPYKKQYDLLK 517          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METVS (V-type ATP synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpA PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.851e-77
Identity = 143/239 (59.83%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G  V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V CLG  +R G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  ++++    D+  +R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++
Sbjct:  285 LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVDCLGSEDRQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYINDIAGWWKKNTGEDWRVLRDEAMGLLQKEAELQEIVQLVGPDALPDRERVILEIARILREDFLQQDAYHEVDSYCSPKKQYNMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_NATPD (V-type ATP synthase alpha chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpA PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.158e-77
Identity = 144/238 (60.50%), Postives = 181/238 (76.05%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M RT L+ANTSNMPVAARE+ +YTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAGK + + G E  GS++++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+ ++ E    +F  +R  A +VL  ED+L EIVQLVGKDAL E  ++TLE A+ +RE +L QNAF   D +C   K+  M+
Sbjct:  290 LMSRTCLIANTSNMPVAARESCVYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGKFQNMNGSE--GSISVIGAVSPPGGDFSEPVTQNTLRIVKCFWALDADLAERRHFPSINWNESYSLYKEQLDPWWRENVHEEFPEVRQWAVDVLDEEDELQEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNAFHDVDTYCEPEKTYQML 525          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_IGNH4 (V-type ATP synthase alpha chain OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=atpA PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.158e-77
Identity = 138/239 (57.74%), Postives = 182/239 (76.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT LVANTSNMPVAAREASIY G+T+AEY+RDMGY+  ++ADSTSRWAEALR+I+GR+ EMPA+ G+P YLA+RLA +YERAG+ +  G PER GSVTI  AVSPPGGDFS+PVTS T   V+VFW LD  LA  +H+P++NWL+SYS Y  T  + ++E   P +   R +   +L +ED+L EIV+LVG ++L+E DK+ +ETA++++E +L QNAF P D FC   K   MM+
Sbjct:  294 LMERTILVANTSNMPVAAREASIYVGVTLAEYYRDMGYDSLLIADSTSRWAEALRDIAGRMEEMPAEEGFPPYLASRLAEYYERAGRARIPGRPERVGSVTIASAVSPPGGDFSEPVTSHTRRFVRVFWALDASLAYARHYPAINWLVSYSLYVDTVAKWWHENISPKWKEYRDEMMSILLKEDELKEIVRLVGPESLSEPDKLIIETARIIKEAFLQQNAFDPIDAFCSPKKQFLMMK 532          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HALVO (V-type ATP synthase alpha chain OS=Halobacterium volcanii GN=atpA PE=1 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 9.189e-77
Identity = 145/229 (63.32%), Postives = 175/229 (76.42%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFC 685
            +M RT L+ANTSNMPVAARE+ IYTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG    + G E  GSV+++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F E  + D+   R  A +VL  E++L EIVQLVGKDAL E  ++TLE A+ LRE YL QNAF P D +C
Sbjct:  291 LMARTCLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFTTVNGEE--GSVSVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPAINWNESYSLYQEQLDPWFVENVEDDWAEERQWAVDVLDEENELQEIVQLVGKDALPEDQQLTLEIARYLREAYLQQNAFHPTDTYC 517          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HALWD (V-type ATP synthase alpha chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpA PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.674e-76
Identity = 144/229 (62.88%), Postives = 175/229 (76.42%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFC 685
            +M RT+L+ANTSNMPVAARE+ +YTGITIAE++RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARLA FYERAG  + + G E  GSV+ +GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+  F E  + D+   R  A +VL  E +L EIVQLVGKDAL +  ++TLE A+ LRE YL QNAF P D +C
Sbjct:  290 LMARTSLIANTSNMPVAARESCVYTGITIAEFYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLAQFYERAGYFENVNGTE--GSVSAIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPSINWDESYSLYKEQLDPWFQENVEDDWPEERQWAVDVLDEESELQEIVQLVGKDALPDDQQLTLEVARYLRESYLQQNAFHPVDTYC 516          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CENSY (V-type ATP synthase alpha chain OS=Cenarchaeum symbiosum GN=atpA PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.560e-76
Identity = 136/229 (59.39%), Postives = 180/229 (78.60%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFC 685
            +M RT LVANTSNMPVAAREASIYTG+TIAEY+RDMG +V ++ADSTSRWAEALRE+SGRL EMPA+ GYP+YLA+RLA FYERAG+V+ LG PER GSVT+VGAVSP GGDF++PVT+ T+  ++ FW LD KLA  +H+PS+NW+ SYS Y   +  ++ E    D+++ R++A  +LQRED L EIV+L+G +AL + +K+ LE A++++   L QN+F   D +C
Sbjct:  287 LMDRTVLVANTSNMPVAAREASIYTGVTIAEYYRDMGKDVVLVADSTSRWAEALREMSGRLEEMPAEEGYPSYLASRLAEFYERAGRVRALGSPERNGSVTLVGAVSPSGGDFTEPVTTHTMRFIKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENVSKDWLDTRSEAYGILQREDTLKEIVRLLGPEALPDEEKLILEVARMMKIGLLQQNSFDDVDTYC 515          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_NITMS (V-type ATP synthase alpha chain OS=Nitrosopumilus maritimus (strain SCM1) GN=atpA PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.263e-75
Identity = 135/239 (56.49%), Postives = 184/239 (76.99%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT LVANTSNMPVAAREASIYTG+TIAEY+RDMG +V ++ADSTSRWAEALRE+SGRL EMPA+ GYP+YLA+RLA FYERAG+V+  G P+R GSVT++GAVSP GGDF++PVT+ T+  ++ FW LD KLA  +H+PS+NW+ SYS Y   +  ++ E  + D++++R++   VLQRED L EIV+L+G +AL + +K+ LE A++++   L QN+F   D +C   K   +M+
Sbjct:  287 LMDRTVLVANTSNMPVAAREASIYTGVTIAEYYRDMGKDVVLVADSTSRWAEALREMSGRLEEMPAEEGYPSYLASRLAEFYERAGRVRAAGSPDRDGSVTLIGAVSPSGGDFTEPVTTHTMRFIKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENINEDWLSLRSEVYGVLQREDTLKEIVRLLGPEALPDEEKLILEVARMVKIGLLQQNSFDDVDTYCSPEKQYKLMK 525          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_METM54.872e-7859.83V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_THET86.363e-7861.09V-type ATP synthase alpha chain OS=Thermus thermop... [more]
VATA_METTP1.085e-7759.83V-type ATP synthase alpha chain OS=Methanosaeta th... [more]
VATA_METVS1.851e-7759.83V-type ATP synthase alpha chain OS=Methanococcus v... [more]
VATA_NATPD3.158e-7760.50V-type ATP synthase alpha chain OS=Natronomonas ph... [more]
VATA_IGNH43.158e-7757.74V-type ATP synthase alpha chain OS=Ignicoccus hosp... [more]
VATA_HALVO9.189e-7763.32V-type ATP synthase alpha chain OS=Halobacterium v... [more]
VATA_HALWD2.674e-7662.88V-type ATP synthase alpha chain OS=Haloquadratum w... [more]
VATA_CENSY4.560e-7659.39V-type ATP synthase alpha chain OS=Cenarchaeum sym... [more]
VATA_NITMS2.263e-7556.49V-type ATP synthase alpha chain OS=Nitrosopumilus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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