BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ANASK (V-type ATP synthase alpha chain OS=Anaeromyxobacter sp. (strain K) GN=atpA PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.134e-69
Identity = 131/239 (54.81%), Postives = 175/239 (73.22%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPD-FINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            ++ RT ++ NTSNMPVAAREASIYTG  IAEYFRDMG +V++M DSTSRWAEALREIS RL EMP + GYP YLA+RLA FYERAG+V+ LGG E  G+VT+VGAVSPPGGD S+PVT  +L      W L   LA R+H+P+V+W +S++     L  ++E+   D F  +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A  P D  CP  K+  M+R
Sbjct:  280 LLARTVMIVNTSNMPVAAREASIYTGCAIAEYFRDMGRSVALMIDSTSRWAEALREISARLEEMPGEEGYPTYLASRLARFYERAGRVETLGGAE--GAVTMVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWSVSFTLEGDRLAGWFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLR 516          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ANADE (V-type ATP synthase alpha chain OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpA PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.134e-69
Identity = 131/239 (54.81%), Postives = 175/239 (73.22%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPD-FINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            ++ RT ++ NTSNMPVAAREASIYTG  IAEYFRDMG +V++M DSTSRWAEALREIS RL EMP + GYP YLA+RLA FYERAG+V+ LGG E  G+VT+VGAVSPPGGD S+PVT  +L      W L   LA R+H+P+V+W +S++     L  ++E+   D F  +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A  P D  CP  K+  M+R
Sbjct:  280 LLARTVMIVNTSNMPVAAREASIYTGAAIAEYFRDMGRSVALMIDSTSRWAEALREISARLEEMPGEEGYPTYLASRLARFYERAGRVETLGGAE--GAVTMVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWSVSFTLEGDRLAGWFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLR 516          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ANAD2 (V-type ATP synthase alpha chain OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=atpA PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.134e-69
Identity = 131/239 (54.81%), Postives = 175/239 (73.22%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPD-FINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            ++ RT ++ NTSNMPVAAREASIYTG  IAEYFRDMG +V++M DSTSRWAEALREIS RL EMP + GYP YLA+RLA FYERAG+V+ LGG E  G+VT+VGAVSPPGGD S+PVT  +L      W L   LA R+H+P+V+W +S++     L  ++E+   D F  +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A  P D  CP  K+  M+R
Sbjct:  280 LLARTVMIVNTSNMPVAAREASIYTGCAIAEYFRDMGRSVALMIDSTSRWAEALREISARLEEMPGEEGYPTYLASRLARFYERAGRVETLGGAE--GAVTMVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWSVSFTLEGDRLAGWFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLR 516          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA2_TREPA (V-type ATP synthase alpha chain 2 OS=Treponema pallidum GN=atpA2 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.210e-69
Identity = 126/240 (52.50%), Postives = 180/240 (75.00%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVK-CLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRT 718
            +M+RT L+ANTSNMPV+ARE S+Y+GIT+AEY+RDMG +V++MADSTSRWAEALRE+SGR+ EMPA+ G+PAYL  RLA FYERAG+V+ C+    R GSV+I+GAVSP GGDFS+PVT  T   ++ FW LD++LA  +H+P++ W+ SYS+Y+  + +++ ++DP    +R  A ++L++E  L +IV+LVG DAL   D++ L   ++++  +L QNAF P D F    K V ++RT
Sbjct:  295 LMERTILIANTSNMPVSAREVSLYSGITLAEYYRDMGMHVAIMADSTSRWAEALRELSGRMEEMPAEEGFPAYLPTRLAEFYERAGRVETCVA---REGSVSIIGAVSPLGGDFSEPVTQHTKRFIRCFWALDRELAHARHYPAIGWIDSYSEYAQEVSAWWSKYDPRAGALRAAALDLLRKEQRLQQIVRLVGPDALPGEDRLVLMVCEMIKGGFLQQNAFDPTDVFSCPEKQVQILRT 531          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRIL (V-type ATP synthase alpha chain OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=atpA PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.126e-66
Identity = 117/226 (51.77%), Postives = 169/226 (74.78%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +++RTT++ NTSNMPVAAREAS+Y G TI EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL  RLA FYERAG+V  +G  ER GS+TI  +VSPPGGDF++PVTS TL  +  FW L  +LA  +H+P+++WL+++S+Y   +E ++ +   PD+  IR   + +L +E +L EIV+++G +AL+E +K  L  A ++RE +L Q+A+ P D
Sbjct:  289 LLERTTIIVNTSNMPVAAREASVYMGTTIGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLMGSKERIGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLLAFSRYVDTVEVWWSKNISPDWRKIRDTLQSILVKEAELQEIVRILGTEALSEYEKHILNVAYMIREGFLKQDAYNPVD 514          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRAE (V-type ATP synthase alpha chain OS=Pyrobaculum aerophilum GN=atpA PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.245e-65
Identity = 115/226 (50.88%), Postives = 168/226 (74.34%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL  RLA FYERAG+V   G  ER GS+TI  +VSPPGGDF++PVTS TL  +  FW L  +LA  +H+P+++WL+++S+Y   +E ++ +   P++  IR   + +L +E +L EIV+++G +AL+E +K  L  A ++RE +L Q+A+ P D
Sbjct:  289 LLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLYGSKERVGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLVAFSRYVDTVEVWWSKNVSPEWRRIRDALQSILVKEAELQEIVRILGTEALSEYEKHILNVAFMIREGFLKQDAYNPVD 514          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRCJ (V-type ATP synthase alpha chain OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=atpA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.626e-65
Identity = 115/226 (50.88%), Postives = 169/226 (74.78%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL  RLA FYERAG+V  +G  ER GS+TI  +VSPPGGDF++PVTS TL  +  FW L  +LA  +H+P+++WL+++S+Y   +E ++ +   P++  IR   + +L +E +L EIV+++G +AL+E +K  L  A ++RE +L Q+A+ P D
Sbjct:  289 LLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLIGSGERVGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLMAFSRYVDTVEVWWSKNVSPEWRRIRDVLQSILVKEAELQEIVRILGTEALSEYEKHILNVAFMIREGFLKQDAYNPVD 514          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_NITOC (V-type ATP synthase alpha chain OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.626e-65
Identity = 126/229 (55.02%), Postives = 166/229 (72.49%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYS-KYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFC 685
            +M+RT LVANTSNMPV AREAS+Y G+T+ EY+RD GY+V ++ADSTSRWAEALRE++GRL +MP + GYPAYLA+RLA+FYERAG+V+ LGG    GSVT++GAVSPPGGDFS+PVTS T  IV+ FW L K LA  +H+P+V+W  S+S     A   + E  D  +   R +A  +L + ++L+ IV LVG +AL+   +  LE A L++E  L Q+A  P D FC
Sbjct:  285 LMERTLLVANTSNMPVVAREASLYVGVTLGEYYRDQGYDVVIVADSTSRWAEALREVAGRLGQMPVEEGYPAYLASRLAAFYERAGRVQTLGG--SVGSVTLIGAVSPPGGDFSEPVTSHTKEIVRTFWALSKDLADARHYPAVSWRESFSDDIPVAARWWAEHIDKHWQAGRAEAMTLLTQAEELSRIVNLVGPEALSGTQRWILEGATLIKEGLLQQSALDPVDSFC 511          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRAR (V-type ATP synthase alpha chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=atpA PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.773e-65
Identity = 115/226 (50.88%), Postives = 168/226 (74.34%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL  RLA FYERAG+V  +G  ER GS+TI  +VSPPGGDF++PVTS TL  +  FW L  +LA  +H+P+++WL ++S+Y   +E ++ +   P++  IR   + +L +E +L EIV+++G +AL+E +K  L  A ++RE +L Q+A+ P D
Sbjct:  289 LLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLMGSKERIGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLAAFSRYVDTVEVWWSKNVSPEWRKIRDSLQSLLVKEAELQEIVRILGTEALSEYEKHILNVAFMIREGFLKQDAYNPID 514          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THENV (V-type ATP synthase alpha chain OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=atpA PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.178e-65
Identity = 115/226 (50.88%), Postives = 167/226 (73.89%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL  RLA FYERAG+V  +G  ER GS+TI  +VSPPGGDF++PVTS TL  +  FW L  +LA  +H+P+++WL ++S+Y   +E ++ +    ++  IR   + +L +E +L EIV+++G +AL+E +K  L  A ++RE +L Q+AF P D
Sbjct:  289 LLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLIGSKERVGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLAAFSRYVDTVEVWWSKNISTEWRRIRDTLQSLLVKEAELQEIVRILGTEALSEYEKHVLNVAFMIREGFLKQDAFNPVD 514          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_ANASK4.134e-6954.81V-type ATP synthase alpha chain OS=Anaeromyxobacte... [more]
VATA_ANADE4.134e-6954.81V-type ATP synthase alpha chain OS=Anaeromyxobacte... [more]
VATA_ANAD24.134e-6954.81V-type ATP synthase alpha chain OS=Anaeromyxobacte... [more]
VATA2_TREPA9.210e-6952.50V-type ATP synthase alpha chain 2 OS=Treponema pal... [more]
VATA_PYRIL1.126e-6651.77V-type ATP synthase alpha chain OS=Pyrobaculum isl... [more]
VATA_PYRAE1.245e-6550.88V-type ATP synthase alpha chain OS=Pyrobaculum aer... [more]
VATA_PYRCJ1.626e-6550.88V-type ATP synthase alpha chain OS=Pyrobaculum cal... [more]
VATA_NITOC1.626e-6555.02V-type ATP synthase alpha chain OS=Nitrosococcus o... [more]
VATA_PYRAR2.773e-6550.88V-type ATP synthase alpha chain OS=Pyrobaculum ars... [more]
VATA_THENV6.178e-6550.88V-type ATP synthase alpha chain OS=Thermoproteus n... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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