BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLMU (V-type ATP synthase alpha chain OS=Chlamydia muridarum GN=atpA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.014e-56
Identity = 113/234 (48.29%), Postives = 160/234 (68.38%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GITIAEY+R MG +V ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G VK   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY  ++    E+  P + +   KA   L+   ++ + +++VG++ ++  D      ++L    YL QNAF   D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITIAEYYRQMGLHVLLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVKMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGDSVKKASRFLEEGAEIGKRIEVVGEEGISMEDIEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLTR (V-type ATP synthase alpha chain OS=Chlamydia trachomatis GN=atpA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.168e-55
Identity = 111/234 (47.44%), Postives = 159/234 (67.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GITIAEY+R MG ++ ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G VK   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY  ++    E+  P +     +A   L+   ++ + +++VG++ ++  D      ++L    YL QNAF   D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITIAEYYRQMGLHILLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVKMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLTB (V-type ATP synthase alpha chain OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=atpA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.168e-55
Identity = 111/234 (47.44%), Postives = 159/234 (67.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GITIAEY+R MG ++ ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G VK   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY  ++    E+  P +     +A   L+   ++ + +++VG++ ++  D      ++L    YL QNAF   D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITIAEYYRQMGLHILLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVKMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLTA (V-type ATP synthase alpha chain OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=atpA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.168e-55
Identity = 111/234 (47.44%), Postives = 159/234 (67.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GITIAEY+R MG ++ ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G VK   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY  ++    E+  P +     +A   L+   ++ + +++VG++ ++  D      ++L    YL QNAF   D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITIAEYYRQMGLHILLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVKMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLT2 (V-type ATP synthase alpha chain OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=atpA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.168e-55
Identity = 111/234 (47.44%), Postives = 159/234 (67.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GITIAEY+R MG ++ ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G VK   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY  ++    E+  P +     +A   L+   ++ + +++VG++ ++  D      ++L    YL QNAF   D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITIAEYYRQMGLHILLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVKMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLPN (V-type ATP synthase alpha chain OS=Chlamydia pneumoniae GN=atpA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.398e-55
Identity = 108/234 (46.15%), Postives = 159/234 (67.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY G+TIAEY+R MG ++ ++ADSTSRWA+ALREISGRL E+P +  +PAYL++R+A+FYER G +    G E  GS+TI GAVSP GG+F +PVT +TL++V  F GL K  A  + +PS++ LIS+SKY   +    E+    +     KA + L++  ++ + +++VG++ ++  D      A+L    YL QNAF P D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGVTIAEYYRQMGLDILLLADSTSRWAQALREISGRLEEIPGEEAFPAYLSSRIAAFYERGGAITTKDGSE--GSLTICGAVSPAGGNFEEPVTQSTLAVVGAFCGLSKARADARRYPSIDPLISWSKYLNQVGQILEEKVSGWGGAVKKAAQFLEKGSEIGKRMEVVGEEGVSMEDMEIYLKAELYDFCYLQQNAFDPVDCYCPFERQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLAB (V-type ATP synthase alpha chain OS=Chlamydophila abortus GN=atpA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.438e-55
Identity = 112/234 (47.86%), Postives = 156/234 (66.67%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GITIAEY+R MG +V ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G V+   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY   +    E     +     KA   L+   ++ + +++VG++ +   D      ++L    YL QNAF P D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITIAEYYRQMGLHVLLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVRMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDQVGEILEDKVQGWGEAVKKANYFLREGSEIGKRMEVVGEEGIPMEDMEIYLKSELYDFCYLQQNAFDPVDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHLCV (V-type ATP synthase alpha chain OS=Chlamydophila caviae GN=atpA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.202e-54
Identity = 111/234 (47.44%), Postives = 155/234 (66.24%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +M RT ++ NTS+MPVAARE+SIY GIT+AEY+R MG +V ++ADSTSRWA+ALREISGRL E+P +  +PAYLA+R+A+FYER G V+   G E  GS+TI GAVSP GG+F +PVT ATLS+V  F GL K  A  + +PS++ +IS+SKY   +    E     +     KA   L+   ++ + +++VG++ +   D      A+L    YL QNAF   D +CPF + +
Sbjct:  295 LMHRTCIICNTSSMPVAARESSIYLGITVAEYYRQMGLHVLLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVRMKDGSE--GSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDQVGDILENKIQGWGKAVKKANYFLREGSEIGKRMEVVGEEGIPMEDMEIYLKAELYDFCYLQQNAFDAVDCYCPFDRQI 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PARUW (V-type ATP synthase alpha chain OS=Protochlamydia amoebophila (strain UWE25) GN=atpA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54
Identity = 106/234 (45.30%), Postives = 160/234 (68.38%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 703
            +MKRT ++ NTS+MPVAARE+SIY GITIAEY+R MG +V ++ADSTSRWA+ALRE+SGRL E+P +  +PAYL++R+A FYER+G V    G  + GS+TI GAVSP GG+F +PVT ATLS+V  F GL +  +  + +P+++ L+S+SKY   + +        +  +  +AR +L   +++ + +++VG++ ++  D +T   A+L    YL QNAF   D +CP  + +
Sbjct:  299 LMKRTVIICNTSSMPVAARESSIYMGITIAEYYRQMGLDVLVLADSTSRWAQALREMSGRLEEIPGEEAFPAYLSSRIAEFYERSGVVSLRHG--KPGSITIGGAVSPAGGNFEEPVTQATLSVVGAFLGLSRARSDSRRYPAIDPLLSWSKYVDTVGNELSHQVDGWDQMVKRARHILFNGNEIGKRMEVVGEEGISMEDMLTYLKAELYDFSYLQQNAFDKEDAYCPLKRQI 530          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORRA (V-type ATP synthase alpha chain OS=Borrelia recurrentis (strain A1) GN=atpA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.077e-51
Identity = 107/236 (45.34%), Postives = 158/236 (66.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWM 709
            +M+RT ++ NTS+MPVAAREAS+YT ITI+EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P D  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP++N L S+SKY   +E  YE  +         AR  L + +++N+++++VG+D ++  D +    ++LL   YL QN+F   D    F +  +M
Sbjct:  291 LMERTCIICNTSSMPVAAREASVYTAITISEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGDEAFPAYLESVIASFYERAGVVVLNNG--SVGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLDSWSKYRGVVE--YEATE--------YARAFLVKGNEVNQMMRVVGEDGVSIDDFVVYLKSELLDSCYLQQNSFDSVDAAVSFERQNYM 514          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_CHLMU4.014e-5648.29V-type ATP synthase alpha chain OS=Chlamydia murid... [more]
VATA_CHLTR1.168e-5547.44V-type ATP synthase alpha chain OS=Chlamydia trach... [more]
VATA_CHLTB1.168e-5547.44V-type ATP synthase alpha chain OS=Chlamydia trach... [more]
VATA_CHLTA1.168e-5547.44V-type ATP synthase alpha chain OS=Chlamydia trach... [more]
VATA_CHLT21.168e-5547.44V-type ATP synthase alpha chain OS=Chlamydia trach... [more]
VATA_CHLPN3.398e-5546.15V-type ATP synthase alpha chain OS=Chlamydia pneum... [more]
VATA_CHLAB4.438e-5547.86V-type ATP synthase alpha chain OS=Chlamydophila a... [more]
VATA_CHLCV2.202e-5447.44V-type ATP synthase alpha chain OS=Chlamydophila c... [more]
VATA_PARUW2.876e-5445.30V-type ATP synthase alpha chain OS=Protochlamydia ... [more]
VATA_BORRA5.077e-5145.34V-type ATP synthase alpha chain OS=Borrelia recurr... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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