BQ623093

Overview
NameBQ623093
Unique NameBQ623093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 85/162 (52.47%), Postives = 104/162 (64.20%), Query Frame = 2
Query:  161 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKSSLQTA 646
            YFD+ IA +PAGR+   LF   VPKTA NF+ LC G+K   ++G  L Y GS+FHR I  FMLQ            ESIYGEKF DENF+LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFG+V+    +V ++E     +  P    ++ +A
Sbjct:    7 YFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSA 167          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 84/152 (55.26%), Postives = 100/152 (65.79%), Query Frame = 2
Query:  140 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            K+   +V+ DV I G  AGRIVM L+    P+T  NF  LCTG  G GK SGKPLHYKGSTFHR+I +FM+Q            ESIYG  F DE F +KH  P ++SMAN GP+TNGSQFFITT     L+  HVVFGKV+SG +VV K+E
Sbjct:    3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIE 154          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.319e-39
Identity = 85/159 (53.46%), Postives = 101/159 (63.52%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE--GRQNGTP 619
            K +FD+ I GKP GRIV  L+   VPKTAENF  LC G  G+ K+    PL YKGS FHR+I  FM Q            ESIY EKF DENF +KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E +   ++N  P
Sbjct:    5 KTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKP 163          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.253e-39
Identity = 84/156 (53.85%), Postives = 97/156 (62.18%), Query Frame = 2
Query:  161 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYK-VEAEGRQNGTPKS 625
            YFDV   GKP GRIV  L+   VP+T  NFR LC    G G       +K S FHR+IP FM+Q            ESIYG+KF DENF+ KH   G+LSMANAGP+TNGSQFFIT   T WLDG+HVVFGKV+ G D V K +E  G Q+G   S
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSGKTSS 153          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.408e-38
Identity = 83/150 (55.33%), Postives = 96/150 (64.00%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGI--GKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE 598
            K YFD+ I GKPAGR+V  ++    PKTAENF  LC G+ G    K G PL Y+GS FHR+I  FM Q            ESIYGEKF DENF  KH  P LLSMANAGP+TNGSQ FIT   T  LDG+HVVFG+V+ G  VV  +E +
Sbjct:    6 KTYFDLSIGGKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQGKRVVRAIERQ 155          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.401e-38
Identity = 84/162 (51.85%), Postives = 106/162 (65.43%), Query Frame = 2
Query:  158 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKSSL 637
            V+ D+ I G+  GRI + LF   VPKTAENFR  CTGE  +G + KP+ YK STFHRII  FM+Q             +I+  + FPDENF LKH  PGLLSMANAG D+NG QFFITTV   +LDG+HVVFG+V+ G D+V ++E+     N  PKS  ++
Sbjct:    7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.401e-38
Identity = 86/160 (53.75%), Postives = 105/160 (65.62%), Query Frame = 2
Query:  128 DQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTV-TTSWLDGRHVVFGKVLSGMDVVYKVEAEGR 604
            DQ+ + IT KV+FD+E   +  GRIV+GL+GK  PKTA+NF  L T      K G    + GSTFHR+IP+FM+Q            +SIYG+ FPDENF LKH   G LSMAN G DTNGSQFFITT    SWLDG+HVVFG+V+ GMDVV  ++   R
Sbjct:   28 DQDDEVITQKVFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNS--KKG----FIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSR 181          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.136e-38
Identity = 78/146 (53.42%), Postives = 99/146 (67.81%), Query Frame = 2
Query:  158 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            V+FDV + G+P GR+ + LF    P+TAENFR  CTGE    + G+P  YKGS FHR+I  FM+Q             +IYG  KF DENF L+H  PGLLSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+ GMD+V  +E
Sbjct:   18 VFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIE 162          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 84/163 (51.53%), Postives = 104/163 (63.80%), Query Frame = 2
Query:  104 SSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            ++I AK+      EIT+KVYFD+    K  GRIVMGL+G   P+T ENF  L      I +  K + Y  S FHR+IP+FM+Q            +SI+G  F DENF +KH  PG LSMAN G +TNGSQFFITTV   WLDG+HVVFG+VL GMDVV+ +E
Sbjct:   18 TAIFAKEDTAEDPEITHKVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLT-----ISRDPK-MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIE 174          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.986e-38
Identity = 85/158 (53.80%), Postives = 99/158 (62.66%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSK 628
            K +FD++   +  GRI+  LF   VP T  NFR LCT +   G       YKGS FHRIIP FM Q            +SIYG KF DENF  KH    L SMANAGP+TNGSQFFITTV  SWLDG+HVVFGKV+SG+DVV K+E+ G  +G P  K
Sbjct:    4 KAFFDIKAGDERLGRIIFELFND-VPDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFSL-SMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLGSTSGKPSKK 152          
The following BLAST results are available for this feature:
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPID_CRYNE1.663e-3952.47Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
CYP1_BRUMA2.172e-3955.26Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPID_YEAST6.319e-3953.46Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
CYPH_UROFA8.253e-3953.85Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
PPID_ASHGO1.408e-3855.33Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPIH_SCHPO2.401e-3851.85Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
CYPB_YEAST2.401e-3853.75Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
PPIH_EMENI3.136e-3853.42Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
CYPD_YEAST5.349e-3851.53Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
PPIA_SCHMA6.986e-3853.80Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00184 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00184 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623093 ID=BQ623093; Name=BQ623093; organism=Citrus sinensis; type=EST; length=646bp
GTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAA
ATTTGCTTCCACTCACAGATGCTATGGGCCTGTTGTCCTGTTGGCCACCT
TTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCAC
AAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTA
TTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTC
CGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACT
CCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTC
AAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTAT
GGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGG
GCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCT
TCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTT
GGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGG
GAGGCAGAATGGCACTCCGAAAAGCAAGTCGTCATTGCAGACAGCG
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