BQ623093

Overview
NameBQ623093
Unique NameBQ623093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.124e-38
Identity = 84/153 (54.90%), Postives = 97/153 (63.40%), Query Frame = 2
Query:  161 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 619
            YF + I GK    I   LF   VPKT +NF +LC G +   K G+ L YKGS FHR+I +FMLQ            ESIYGEKF DENF+LKH  P LLSMANAGP+TNGSQFFITTV T  LDG+HVVFGKV+ G   V  +E    +N  P
Sbjct:    6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDP 155          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.192e-37
Identity = 80/145 (55.17%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  158 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            V+ +V   G P G IV+ LF    P+TAENFR  CTGE    K G P  YK  TFHR+I  FM+Q             SIYG KF DENF+LKH GPG+LSMANAG DTNG QFFIT   T +LD +HVVFG+VL GM  V K+E
Sbjct:   19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGE--YKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIE 161          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 3.467e-37
Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  161 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            +FD+EI  +P GRI+  LF    PKT +NF  LC+GEKG+GK+ GK L YKGSTFHR++ +FM+Q            ESIYG  F DENF LKH    LLSMAN G  TNGSQFFITT     LDG HVVFG V+SG +V+ ++E
Sbjct:   10 HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIE 154          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.467e-37
Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  161 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            +FD+EI  +P GRI+  LF    PKT +NF  LC+GEKG+GK+ GK L YKGSTFHR++ +FM+Q            ESIYG  F DENF LKH    LLSMAN G  TNGSQFFITT     LDG HVVFG V+SG +V+ ++E
Sbjct:   10 HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIE 154          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.528e-37
Identity = 80/151 (52.98%), Postives = 97/151 (64.24%), Query Frame = 2
Query:  158 VYFDVEIAGKPAGR-----IVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 595
            VY D+     PA R     IV+ L+   VP+TAENFR LCT    +  +G+PL ++ S FHR+IP FM+Q            ESIYGEKF DE+   KH  P LLSMANAG +TNGSQFFITTV T  LDG+HVVFG+VL G  VV +VE+
Sbjct:   15 VYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVES 165          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.009e-36
Identity = 78/146 (53.42%), Postives = 95/146 (65.07%), Query Frame = 2
Query:  158 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            V+FD+ + G P GRI M LF    P+TAENFR  CTGE      GKP  YK S FHR+I  FM+Q             +IYG  KF DENF LKH   G+LSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+ GMD+V  +E
Sbjct:   16 VFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIE 160          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.834e-36
Identity = 77/146 (52.74%), Postives = 95/146 (65.07%), Query Frame = 2
Query:  158 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            V+FD+ + G+  GRI M LF    P+TAENFR  CTGE      G+P  YK S FHR+I  FM+Q             +IYG  +F DENF LKH  PGLLSMAN+GP+TNG QFFITT  T +L+ +HVVFG+V+ GMDVV  +E
Sbjct:   16 VFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIE 160          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.007e-36
Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            + +FD+ I G+PAGRIV  L+    P+T ENFRA CTGE G   +G    Y+GS FHR+I  FM+Q             SIYG  F DEN  LKH  P LLSMAN GPDTNGSQFFIT+     LDG+H VFG+V+ G++VV  +E
Sbjct:   10 RAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELG-KMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIE 154          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.115e-35
Identity = 74/149 (49.66%), Postives = 93/149 (62.42%), Query Frame = 2
Query:  146 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            +T+K+Y DV+   KP GRIV GLFGK  PKT  NFR +C   +GI  +     Y GS FHR+I  F++Q             SIYG+ F DE   ++H  PG L MAN GPDTNG QF++TTV   WL+G+H VFGKV+ GMD VY +E
Sbjct:   24 VTSKIYMDVKHQKKPLGRIVFGLFGKRAPKTVTNFRHICL--RGINGTT----YVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKVIEGMDTVYAIE 166          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.238e-35
Identity = 74/151 (49.01%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  146 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKL--KHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            +T+++Y DV+   KP GRI  GLFGK  PKT  NFR +C   +GI  +     Y GS FHR++  F++Q             SIYG+ FPDE+  L  +H  PG L MAN GPDTNG QF++TTV   WLDG+H VFGKVL GMD +Y +E
Sbjct:   25 VTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGINGTS----YVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIE 169          
The following BLAST results are available for this feature:
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPID_SCHPO9.124e-3854.9040 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
CYP11_CAEEL1.192e-3755.17Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
NKTR_MOUSE3.467e-3755.17NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN3.467e-3755.17NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPID_USTMA4.528e-3752.98Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIH_ASPFU1.009e-3653.42Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_ASPOR3.834e-3652.74Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
CYP8_CAEEL5.007e-3652.05Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
CYPR_CALVI1.115e-3549.66Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPR_DROME4.238e-3549.01Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00184 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00184 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623093 ID=BQ623093; Name=BQ623093; organism=Citrus sinensis; type=EST; length=646bp
GTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAA
ATTTGCTTCCACTCACAGATGCTATGGGCCTGTTGTCCTGTTGGCCACCT
TTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCAC
AAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTA
TTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTC
CGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACT
CCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTC
AAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTAT
GGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGG
GCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCT
TCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTT
GGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGG
GAGGCAGAATGGCACTCCGAAAAGCAAGTCGTCATTGCAGACAGCG
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