BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.304e-41
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 3
Query:   36 STSFIRSKPTATSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            S+S +R+ P  T++ A+P     + G  A+   R+ A ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG+VDQS+QS+LDD Q+ +G+VLTC AYPTSDV IETHKEEEL G
Sbjct:   16 SSSSLRAAPAPTAV-ALPAAKVGIMGRSASSRRRLRAQATYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEELTG 149          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.595e-39
Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 437
            ATYKV L+TP G + I+CPDDT++LDAAEEAGLDLPYSCRAG+CSSC GKV +GTVDQ +QSFLDDDQ+  GFVLTC AYP  DVTIETHKEE++A
Sbjct:    1 ATYKVTLVTPSGTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGDVTIETHKEEDIA 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_WHEAT (Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.083e-39
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 3
Query:  117 KANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            K  RG R+ A ATYKVKL+TP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +DQS+QSFLDDDQM  G+VLTC AYP SD+ IETHKEEEL
Sbjct:   36 KQVRGARLRAQATYKVKLVTPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWVLTCHAYPKSDIVIETHKEEEL 141          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.720e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            ATYKVKL+TP G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.720e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            ATYKVKL+TP G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.552e-39
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA+Y VKLITP GE  I C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+VDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEE+L
Sbjct:    1 MASYTVKLITPDGENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.552e-39
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA+Y VKLITP GE  I C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+VDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEE+L
Sbjct:    1 MASYTVKLITPDGESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.552e-39
Identity = 76/95 (80.00%), Postives = 82/95 (86.32%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATYKV L TP G++ I CPDDT+ILDAAEEAGLDLPYSCRAGACSSC GKV +GTVDQS+QSFLDD QM  GFVLTC AYPTSD TI THKEE+L
Sbjct:    1 ATYKVTLKTPSGDQTIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_PHYAM (Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.552e-39
Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATYKV L+TP G + I+CPDDT++LDAAEEAGLDLPYSCRAG+CSSCTGKV +GTVDQ +QSFLDDDQ+  GFVLTC A+P  DVTIETHKEE++
Sbjct:    1 ATYKVTLVTPSGTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCTGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAFPKGDVTIETHKEEDI 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.639e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            ATYKVKL+TP G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM EGFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER1_MAIZE1.304e-4162.22Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE... [more]
FER1_PHYES1.595e-3976.04Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1[more]
FER_WHEAT2.083e-3971.70Ferredoxin, chloroplastic OS=Triticum aestivum GN=... [more]
FER_DATST2.720e-3976.29Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU2.720e-3976.29Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_SYNY43.552e-3977.08Ferredoxin OS=Synechocystis sp. (strain PCC 6714) ... [more]
FER_SYNY33.552e-3977.08Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803... [more]
FER_SCEQU3.552e-3980.00Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1[more]
FER1_PHYAM3.552e-3975.79Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1[more]
FER_DATME4.639e-3976.29Ferredoxin OS=Datura metel PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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