BQ623109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.571e-24 Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFE------LEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 +++ + ++++Y+I +GW PCLEF + R S GYYD RYWTMWKLPM+GCTD +QVL+EV Q +P+ ++R++ FDN +QVQC+ F+ +P Sbjct: 50 TNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRP 154
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.358e-24 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEF-ELEKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 SDE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QVQ + F+ +P Sbjct: 67 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.728e-24 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEF-ELEKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 +DE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QVQ + F+ +P Sbjct: 67 TDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.276e-23 Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 156 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 262 HSP 2 Score: 108.612 bits (270), Expect = 1.276e-23 Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 300 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 406 HSP 3 Score: 108.612 bits (270), Expect = 1.276e-23 Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 587 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 693 HSP 4 Score: 108.612 bits (270), Expect = 1.276e-23 Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 730 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 836 HSP 5 Score: 108.612 bits (270), Expect = 1.276e-23 Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 1018 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 1124 HSP 6 Score: 106.686 bits (265), Expect = 4.849e-23 Identity = 48/107 (44.86%), Postives = 70/107 (65.42%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD YWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 443 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 549 HSP 7 Score: 106.686 bits (265), Expect = 4.849e-23 Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P Sbjct: 1162 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 8 Score: 104.375 bits (259), Expect = 2.407e-22 Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 SD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR + FD+ +QVQ ISF+ +P G Sbjct: 875 SDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSG 980
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.475e-21 Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTDA+QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 64 TDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.539e-21 Identity = 44/106 (41.51%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +DE + K+++Y++ + W PCLEF ++ + E+ + G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 64 TDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.928e-21 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 66 TDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.928e-21 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 64 TDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.928e-21 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 65 TDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.928e-21 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 +DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 55 TDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 160 The following BLAST results are available for this feature:
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623109 ID=BQ623109; Name=BQ623109; organism=Citrus sinensis; type=EST; length=454bpback to top |