BQ623110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.014e-54 Identity = 67/98 (68.37%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 523 VLMG VEGYR+ AFDPLGLADDPD FAELKVKE+KNGRLAMF+ GFFVQAIVTGKGPIENL DH+A+P NNA+AYAT F P Sbjct: 175 VLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272 HSP 2 Score: 96.2857 bits (238), Expect = 7.014e-54 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILS-KNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TF + RELE+IH+R +LGALG V PE+L+ ++G+KFG+A +WFKAGA IF +GGL+YLGNP+LIHAQ+I+A A G Sbjct: 97 TFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMG 178
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.492e-53 Identity = 63/101 (62.38%), Postives = 68/101 (67.33%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXA--FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 526 VLMG E YR FDPLGLADDPD FAELKVKE+KNGRLAMFS GFFVQAIVTGKGP++NL DH+ADP N A+A AT F PG Sbjct: 152 VLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252 HSP 2 Score: 107.071 bits (266), Expect = 4.492e-53 Identity = 52/81 (64.20%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFA+ RE+E+IH+RWA+LGALG + PE+LS+ GV+FGE VWFKAGAQIF++GGL+YLGN +LIHAQSI+A A G Sbjct: 75 TFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMG 155
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 8.498e-42 Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFAKNRELEVIH RWAMLGALGCVFPE+L+KNGVKFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQSILAIWAC G Sbjct: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMG 168 HSP 2 Score: 40.817 bits (94), Expect = 8.498e-42 Identity = 20/41 (48.78%), Postives = 23/41 (56.10%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQF 352 VLMG VEGYR+ AFDPLGLA+DP+ F Sbjct: 165 VLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 8.991e-40 Identity = 82/123 (66.67%), Postives = 89/123 (72.36%), Query Frame = 2 Query: 161 LTILATPTSFMLRAFWLSGPATPVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 L L P ++ A VLMGFVEGYR+ AFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWA+ATNFVPGK Sbjct: 143 LDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265 HSP 2 Score: 150.214 bits (378), Expect = 7.877e-36 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYGF 243 TFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA GF Sbjct: 90 TFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGF 170
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.721e-39 Identity = 74/100 (74.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK Sbjct: 168 VLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267 HSP 2 Score: 32.3426 bits (72), Expect = 3.721e-39 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 181 NLIHAQSILAIWACHACAYG 240 +L+HAQSILAIWAC G Sbjct: 152 SLVHAQSILAIWACQVVLMG 171
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.721e-39 Identity = 74/100 (74.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK Sbjct: 168 VLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267 HSP 2 Score: 32.3426 bits (72), Expect = 3.721e-39 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 181 NLIHAQSILAIWACHACAYG 240 +L+HAQSILAIWAC G Sbjct: 152 SLVHAQSILAIWACQVVLMG 171
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.462e-39 Identity = 82/110 (74.55%), Postives = 85/110 (77.27%), Query Frame = 2 Query: 200 AFWLSGPATPVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 A W S VLMGFVEGYR+ AFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DHIADPVANNAWAYATNFVPGK Sbjct: 131 AIWAS---QVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237 HSP 2 Score: 149.828 bits (377), Expect = 1.029e-35 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYGF 243 TFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA GF Sbjct: 62 TFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGF 142
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.023e-39 Identity = 73/100 (73.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 17 VLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116 HSP 2 Score: 32.3426 bits (72), Expect = 5.023e-39 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 181 NLIHAQSILAIWACHACAYG 240 +L+HAQSILAIWAC G Sbjct: 1 SLVHAQSILAIWACQVVLMG 20
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.318e-39 Identity = 73/100 (73.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 166 VLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265 HSP 2 Score: 32.3426 bits (72), Expect = 6.318e-39 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 181 NLIHAQSILAIWACHACAYG 240 +L+HAQSILAIWAC G Sbjct: 150 SLVHAQSILAIWACQVVLMG 169
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.318e-39 Identity = 73/100 (73.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 166 VLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265 HSP 2 Score: 32.3426 bits (72), Expect = 6.318e-39 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 181 NLIHAQSILAIWACHACAYG 240 +L+HAQSILAIWAC G Sbjct: 150 SLVHAQSILAIWACQVVLMG 169 The following BLAST results are available for this feature:
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623110 ID=BQ623110; Name=BQ623110; organism=Citrus sinensis; type=EST; length=623bpback to top |