BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2DJ_CALJA (Cytochrome P450 2D19 OS=Callithrix jacchus GN=CYP2D19 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 58/188 (30.85%), Postives = 94/188 (50.00%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 566
            F+DE +   +  L  AG  TTS  +   +  +   P    ++++E D++  +  + E     D   MP+T  V++E  R A+I+  GV      DI ++G+ IPKG  +F +  +V  D  +++    F+P  + +  G       F PF  G R C G  LAR+EL +F   L+ RFS+ VPA Q +
Sbjct:  290 FNDENLHLVVADLFSAGMVTTSITLAWGLLLMILHPDVQRRVQQEIDDVIGRVRRPE---MGDQTYMPYTTAVIHEVQRFADIVPLGVTHMTSRDIEVQGFLIPKGTTLFTNLSSVLKDEANWEKPFRFHPEHFLDAQGRFVKPEAFLPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPR 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP241_CANFA (Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C41 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK 566
            F+ E +      L  AG ETTST +   +  L + P    +++EE D +  +   Q P    D   MP+T  V++E  R  +++      A+T D+  + Y IPKG  +  S  +V  D   F     F+P  + ++SG     + F  F  G R+C G  LAR+EL +FL  ++ +F+  P    K
Sbjct:  281 FTFENLKTIATDLFGAGTETTSTTLRYGLLLLLKHPEVTVKVQEEIDRVIGRH--QSP-HMQDRSRMPYTNAVLHEIQRYIDLVPNSLPHAVTCDVKFRNYVIPKGTTILISLSSVLSDEKEFPRPEIFDPAHFLDDSGNFKKSDYFMAFSAGKRICVGEGLARMELFLFLTTILQKFTLKPLVDPK 464          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2C6_RAT (Cytochrome P450 2C6 OS=Rattus norvegicus GN=Cyp2c6 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 58/178 (32.58%), Postives = 87/178 (48.88%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            F+ E +   +  L  AG ETTST +  A+  L + P   A+++EE D +  K   + P    D   MP+T    +E  R  ++I      A+T DI  + Y IPKG  +  S  +V  D   F D   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  282 FTLENLSITVTDLFGAGTETTSTTLRYALLLLLKCPEVTAKVQEEIDRVVGKH--RSPC-MQDRSRMPYTDAHDHEVQRFIDLIPTNLPHAVTCDIKFRNYLIPKGTTIITSLSSVLHDSKEFPDPEIFDPGHFLDGNGKFKKSDYFMPFSAGKRMCAGEGLARMELFLFLTTILQNF 456          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2A3_RAT (Cytochrome P450 2A3 OS=Rattus norvegicus GN=Cyp2a3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW--VPAEQD-----KLVFFST 584
            L  AG ET ST +      L + P   A++ EE D +  +  + +   + D   MP+T+ V++E  R A++I  G+ RR   D   + + +PKG  VF    +V  D   F +   FNP  + ++ G     + F PF  G R C G  LAR+EL +FL +++  F +    A QD     +LV F+T
Sbjct:  298 LFFAGTETVSTTLRYGFLLLMKHPDIEAKVHEEIDRVIGRNRQAK---YEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFREFLLPKGTEVFPMLGSVLKDPKFFSNPNDFNPKHFLDDKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFCFKSPQAPQDIDVSPRLVGFAT 482          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 52/182 (28.57%), Postives = 96/182 (52.75%), Query Frame = 3
Query:    6 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRR-AMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGA--TSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            G S++ ++  +  +  AG ETTST++  A+ +L   P    +++EE D +      + P + +D  S+P+ +  + E LR+  +   +    A TD +I  +T+ KG R+  +  ++H D   +K+   F+P R+ N  G     P   + PFG G R+C G  LA++E+ +FL  ++ R +
Sbjct:  293 GLSEDHLLMTVGDIFGAGVETTSTVLKWAIAYLIHHPQVQQRIQEELDSVVG--GDRTP-QLSDRGSLPYLEATIREVLRIRPVAPLLIPHVAQTDTSIGKFTVRKGARIIINLWSLHHDEKEWKNPEMFDPGRFLNEEGTGLCIPSPSYLPFGAGVRVCLGEALAKMEIFLFLSWILQRLT 471          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 51/188 (27.13%), Postives = 92/188 (48.94%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVF 575
            +D EI+   +  + AGYET+S+ +T     L   P  + +L+EE D     K+   P+ +     M +  CV+NE+LR+  I + + R A   + I G  IPK   V      +H D + + +  +F P R+   +       ++ PFG GPR C G   A V + + +  ++ ++S+   ++ ++ F
Sbjct:  290 TDHEILSQSMIFIFAGYETSSSSLTFLAYNLATNPEVMKKLQEEIDATFPNKA---PVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPF 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 51/188 (27.13%), Postives = 92/188 (48.94%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVF 575
            +D EI+   +  + AGYET+S+ +T     L   P  + +L+EE D     K+   P+ +     M +  CV+NE+LR+  I + + R A   + I G  IPK   V      +H D + + +  +F P R+   +       ++ PFG GPR C G   A V + + +  ++ ++S+   ++ ++ F
Sbjct:  290 TDHEILSQSMIFIFAGYETSSSSLTFLAYNLATNPEVMKKLQEEIDATFPNKA---PVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPF 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 62/214 (28.97%), Postives = 102/214 (47.66%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQ--DKLVFFSTTRTQKRYPIIVHVEMKVKAL 644
            SD E+    +  + AGYE+TST + L +  L   P    +L   HDEI +    + P+ ++    M +   V+NE LR+  I + + R +   + I G  IPKG  V      +H D +++ +   F P R+ + N G+  P  V+ PFG GPR C G   A + + + +  ++  F+    EQ  + L F      Q   PII+ +  + K +
Sbjct:  291 SDLEMAAQAIIFIFAGYESTSTSICLVLYELATHPDVQKKL---HDEIDSALPNKAPVTYDVLMGMEYLDMVINEGLRLYPIANRLERISKKAVEINGLFIPKGITVMVPTYPLHRDPEYWPEPEEFRPERFSKENKGSIDPY-VYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQTCEQTENHLKFARQIILQPENPIILKIISRDKPI 500          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CT_MOUSE (Cytochrome P450 2C29 OS=Mus musculus GN=Cyp2c29 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 57/178 (32.02%), Postives = 88/178 (49.44%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            FS E +   +  L  AG ETTST +  A+  L + P   A+++EE D +  +   + P    D   MP+T  +++E  R  +++      A+T DI  + Y IPKG  V  S  +V  D   F +   F+P  + N +G     + F PF  G R+C G  LAR+EL + L  ++  F
Sbjct:  282 FSLENLASTINDLFGAGTETTSTTLRYALLLLLKYPDVTAKVQEEIDRVVGRH--RSPC-MQDRSHMPYTDAMIHEVQRFIDLLPTSLPHAVTCDIKFRKYLIPKGTTVITSLSSVLHDSKEFPNPEMFDPGHFLNANGNFKKSDYFMPFSTGKRICAGEGLARMELFLILTTILQNF 456          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2A8_MESAU (Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP2A8 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 51/166 (30.72%), Postives = 80/166 (48.19%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            L  AG ET ST        L + P   A++ EE D++  +  + +   + D+  MP+T+ V+ E  R  +++  G+ R    DI  + + IPKG  VF    +V  D   F +   FNP  + ++ G     N F PF  G R C G  LA++EL +F   ++  F
Sbjct:  298 LFFAGTETVSTTTRYGFLLLMKYPHIAAKMHEEIDQVIGRNRQPK---YEDHLKMPYTEAVIYEIQRFVDVVPLGLPRSTTKDIKFRDFLIPKGTDVFPVLSSVLKDPKFFSNPNDFNPQHFSDDKGQFKKSNAFMPFSVGKRYCFGESLAKMELFIFFTTIMQNF 460          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
CP2DJ_CALJA1.301e-1630.85Cytochrome P450 2D19 OS=Callithrix jacchus GN=CYP2... [more]
CP241_CANFA1.301e-1629.95Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C4... [more]
CP2C6_RAT1.699e-1632.58Cytochrome P450 2C6 OS=Rattus norvegicus GN=Cyp2c6... [more]
CP2A3_RAT1.699e-1631.91Cytochrome P450 2A3 OS=Rattus norvegicus GN=Cyp2a3... [more]
CP17A_ONCMY1.699e-1628.57Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]
C356_FUNHE1.699e-1627.13Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]
C330_FUNHE1.699e-1627.13Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
CP3AA_MESAU2.218e-1628.97Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
CP2CT_MOUSE2.218e-1632.02Cytochrome P450 2C29 OS=Mus musculus GN=Cyp2c29 PE... [more]
CP2A8_MESAU2.218e-1630.72Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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