BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8605 contig Csv1_Contig8605:591..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 61/187 (32.62%), Postives = 96/187 (51.34%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            S+ EI    +  + AGYETTS+I++  V  L   P    +L+EE DE    K+   P  ++   +M +   V+NETLR+  I + + R    D+ I G  IPKG  V      +H D  H+ +   F P R+ + N G+  P  V+ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  292 SEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKA---PPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHWPEPEEFQPERFSKENKGSIDPY-VYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQPCKETQI 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 65/209 (31.10%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQD----KLVFFSTTRTQKRYPIIVHVE 626
            SD E+V   +  + AGYETTS+ ++  +  L   P    +L+EE D +   K+   P  ++    M +   VVNETLR+  +   + R    D+ I G  IPKG  V     A+H D  ++ +   F P R+  N+       ++TPFG GPR C G   A + + + L  ++  FS+ P ++     KL      +T+K  PI++ VE
Sbjct:  291 SDLELVAQSIIFIFAGYETTSSTLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PATYDTVLQMEYLDMVVNETLRLFPLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYWTEPEKFLPERFSKNNKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLRLGGLLQTEK--PIVLKVE 494          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD EI    +  + AGYETTS+ ++  +  L   P    +L++E DE    K+   P  ++    M +   V+NETLR+  I + + R    D+ + G  IPKG  V     A+H D  H+ +   F P R+ + N G+  P  V+ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  292 SDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKA---PPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPEEFQPERFSKENKGSIDPY-VYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQPCKETQI 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP26A_XENLA (Cytochrome P450 26A1 OS=Xenopus laevis GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 57/170 (33.53%), Postives = 84/170 (49.41%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDE---IRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 545
            LL  G+ TT++  T    FL      L ++++E +    +  K  +++ L     + + +T CV+ ETLR++  ++G FR A+    + GY IPKGW V  S    H + D F D   FNP R+       S    F PFGGG R C G E A++ L VF+  L     W
Sbjct:  291 LLFGGHGTTASAATSLTSFLALHKDVLEKVRKELETQGLLSTKPEEKKELSIEVLQQLKYTSCVIKETLRLSPPVAGGFRVALKTFVLNGYQIPKGWNVIYSIADTHGEADLFPDTDKFNPDRFLTPLPRDSSRFGFIPFGGGVRCCIGKEFAKILLKVFVVELCRNCDW 460          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 63/206 (30.58%), Postives = 100/206 (48.54%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFSTTRTQKRYPIIVHV 623
            SD E+V      +  GYETTS+ ++  +  LT  P    +L+EE D     K+   P  ++    M +   VVNETLR+  I   + R    D+ I G TIPKG  V      +H + + + +   F P R+  N+  +    V+ PFG GPR C G   A + + + L  ++  FS+ P ++ +  L  ++   TQ   P+I+ V
Sbjct:  291 SDIELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKA---PPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEEFRPERFSKNNKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFKPCKETQIPLKLYTQGLTQPEQPVILKV 493          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP26A_DANRE (Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 59/183 (32.24%), Postives = 87/183 (47.54%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEP---LEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWV 548
            FS + + +    LL  G+ETT++  T  V FL      + +++EE  E + +     P   L       + +T CV+ ETLR+   + G FR A+    + GY IPKGW V  S    H   D F +   F P R+ +          + PFGGG R+C G E A+V L +FL  L    +W+
Sbjct:  281 FSLQAMKEAATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQE-KVEMGMYTPGKGLSMELLDQLKYTGCVIKETLRINPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKEEFQPERFMSKGLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWI 462          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 56/182 (30.77%), Postives = 99/182 (54.40%), Query Frame = 3
Query:    6 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRR-AMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGAT--SPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            G +D+ ++  +  +  AG ETT+T++  ++ +L   P    +++EE D   AK  +    + ND  ++P+ +  + E LR+  +   +    A++D NI  YT+ KG RV  +  ++H D   +K+   FNP R+ N  G +   P   + PFG G R+C G  LA++EL +FL  ++ RF+
Sbjct:  289 GLTDDHLLMTVGDIFGAGVETTTTVLKWSILYLIHHPQVQRKIQEELD---AKIGRDRHPQVNDRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLNEEGNSLCCPSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFT 467          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 62/206 (30.10%), Postives = 100/206 (48.54%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTTR--TQKRYPIIVHV 623
            S+EE+V   +  + AGYETTS+ ++L    L   P    +L+EE   I A    + P  ++    M +   VVNETLR+  I + + R    D+ I G  +PKG  V      +H D D + +   F P R+      T     + PFG GPR C G   A + + + L  ++  FS+ P ++ ++    TT+  TQ   P+++ +
Sbjct:  291 SNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEE---IEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFKPCKETQIPLKLTTQGLTQPEKPVVLKI 493          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2J6_MOUSE (Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 61/188 (32.45%), Postives = 94/188 (50.00%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            F++E ++   + L  AG ETTST +  A+ ++   P    +++ E D +  +K         D +SMP+T  V++E  R+ NII   V R    D N+ G+ +PKG  V  +  A+H D   +     FNP  +  N G       F PF  G R C G +LAR EL +F   L+ +F++ P   +KL
Sbjct:  295 FNEENLICSTLDLFFAGTETTSTTLRWALLYMALYPEVQEKVQAEIDRVIGQK---RAARLADRESMPYTNAVIHEVRRMGNIIPLNVPREVAMDTNLNGFHLPKGTMVLTNLTALHRDPKEWATPDVFNPEHFLEN-GQFKKRESFLPFSMGKRACLGEQLARSELFIFFTSLMQKFTFNPPINEKL 478          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 60/186 (32.26%), Postives = 92/186 (49.46%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD EIV   V  + AGYETTS+ ++ A+  L   P    +L+   DEI A    + P  ++    M +   VVNETLR+  I   + R   TD+ I G  IPKG  V     A+H D  ++ +   F P R+   +  +    ++ PFG GPR C G   A + + V L  ++  F+  P ++ ++
Sbjct:  291 SDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQ---DEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEI 473          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
CP3AG_MOUSE1.257e-1932.62Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AL_CALJA1.641e-1931.10Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
CP3AB_MOUSE1.641e-1931.55Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP26A_XENLA2.144e-1933.53Cytochrome P450 26A1 OS=Xenopus laevis GN=cyp26a1 ... [more]
CP3AS_BOVIN2.800e-1930.58Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP26A_DANRE2.800e-1932.24Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=... [more]
CP17A_ICTPU2.800e-1930.77Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
CP3AT_PIG3.657e-1930.10Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP2J6_MOUSE3.657e-1932.45Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2... [more]
CP3AD_MOUSE4.776e-1932.26Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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