BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8605 contig Csv1_Contig8605:591..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDE--IRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 545
            LL  G+ETT++  T  + +L   P  L +++EE     +  K ++   L+    + + +  CV+ ETLR+   + G FR A+    + GY IPKGW V  S    H   + F +   FNP R+       +    F PFGGG R C G E A++ L +F   L     W
Sbjct:  297 LLFGGHETTASAATSLITYLGLYPHVLQKVREELKSKGLLCKSNQDNKLDMEILEQLKYIGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDW 465          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 61/204 (29.90%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   21 EIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFSTTRTQKRYPIIVHV 623
            E+V      +  GYETTST ++  +  L   P    +L+EE D     K+   P  ++    M +   VVNETLR+  I   + R    D+ I G +IPKG  V      +H + + + +   F P R+ + N    +P  V+ PFG GPR C G   A + + + L  ++  FS++P ++ +  L  ++   TQ   P+I+ V
Sbjct:    5 ELVAQTTIFIFGGYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKA---PPTYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGINPY-VYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSFIPCKETQIPLKLYTQGLTQPEQPVILKV 204          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 61/206 (29.61%), Postives = 99/206 (48.06%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFSTTRTQKRYPIIVHV 623
            SD EI+   +  + AGYETTS+ ++  +  L   P    +L++E D+    K+      ++    M +   VVNETLR+  + + + R +  D  I G + PKG  V     A+H D  ++ +   F P R+   +       ++ PFG GPR C G  +A + L + L  L+  FS+ P ++ +  L   S    Q   PII+ V
Sbjct:  291 SDVEILAQSIIFIFAGYETTSSTLSFIMYSLATHPDVQKKLQQEIDKTLPNKAFPT---YDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERFSKKNKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSFYPCKETQIPLRLGSEALLQPAKPIILKV 493          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2J5_MOUSE (Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            F++E ++   + L + G ETTS+ +  A+ +++  P     ++ E D +   K +   +  +D +SMP+T  V++E  R+ NI+     R +T D    G+ +PKG  +  +  A+H D   +     FNP  +  N G       F PF  G R C G +LA+ EL +F   L+ +F++ P   +KL
Sbjct:  295 FNEENLISTTLDLFLGGTETTSSTLRWALLYMSSYPEIQENVQAEIDRVIGHKRQ---VSLSDRESMPYTNAVIHEVQRMGNIVPLNSSREVTVDTKFNGFHLPKGTMILTNLTALHRDPKEWATPEVFNPEHFLEN-GQFKKRESFLPFSMGKRACLGEQLAKSELFIFFSALMQKFTFKPPINEKL 478          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A1_RAT (Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD EI    +  + AGYE TS+ ++  +  L   P    +L+EE D     K+   P  ++    M +   V+NETLR+  I + + R    D+ I G  +PKG  V     A+H D  H+ +   F P R+ + N G+  P  V+ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  292 SDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKA---PPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPY-VYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQI 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CF_RABIT (Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cuniculus GN=CYP2C15 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            F+ E +V  +  L  AG ETTST +++++  L + P   A+++EE + +  +   + P    D   MP+T  V++E  R  ++I      A+T DI  + Y IPKG  +  S  +V  D   F + + F+P  + + SG     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  170 FTLESLVTTVSDLFGAGTETTSTTLSISLLLLLKHPEVAAKVQEEIERVIGRH--RSPC-MQDRSRMPYTDAVIHEIQRYIDLIPINLPHAVTRDIKFRNYFIPKGMNIITSLTSVLHDEKEFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNF 344          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = 3
Query:   15 DEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 545
            D E+V   + +L AGYETTS+ ++  +  L   P    +L+EE D +   K   E   ++    M +   VVNETLR+  I   + R    D++I G  IPKG  V     A+H D  H+ +   F P R+   +       ++ PFG GPR C G   A + + + L  L+  FS+
Sbjct:  290 DIEVVAQSIIILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLLPNK---ELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHWTEPDEFRPERFSKKNKDNINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSF 463          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CP_MESAU (Cytochrome P450 2C25 OS=Mesocricetus auratus GN=CYP2C25 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            FS E +   +  L  AG ETTST +  A+  L + P   A+++EE D++  +  K       D   MP+T  +++E  R  ++I      A+T DI  + Y IPKG  V  S  +V  D+  F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  282 FSLENLTTTVSDLFGAGTETTSTTLRYALLLLLKHPHVTAKVQEEIDQVVGRHRKPC---MQDRSHMPYTDAMIHEVQRFIDLIPISLPHAVTCDIKFRDYFIPKGTTVITSLSSVLHDNKEFPNPEVFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNF 456          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CQ_MESAU (Cytochrome P450 2C26 OS=Mesocricetus auratus GN=CYP2C26 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 57/178 (32.02%), Postives = 90/178 (50.56%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            FS E +   +  L  AG ETTST +  A+  L + P   A+++EE D++  +   + P    D   MP+T  +++E  R  ++I      A+T DI  + Y IPKG  +  S  +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  282 FSPENLATTVSDLFAAGTETTSTTLRYALLLLLKHPHVTAKVQEEIDQVVGRH--RNPC-MQDRSHMPYTDAMIHEVQRFIDLIPTNLPHAVTCDIKFRDYFIPKGTTIITSLSSVLHDSKEFPNPEVFDPGHFLDKNGNFKKSDYFMPFSTGKRMCAGEGLARMELFLFLTTILQNF 456          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2C7_RAT (Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 56/179 (31.28%), Postives = 91/179 (50.84%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            +S E +   ++ L+ AG ET ST +  A+  L + P   A+++EE D +  +   + P    D K MP+T  +++E  R  N +      A+T DI  + Y IPKG +V  S  +V  D   F +   F+P  + + +G     + F PF  G R C G  LAR++L +FL  ++  F+
Sbjct:  282 YSHENLTCSIMDLIGAGTETMSTTLRYALLLLMKYPHVTAKVQEEIDRVIGRH--RSPC-MQDRKHMPYTDAMIHEVQRFINFVPTNLPHAVTCDIKFRNYLIPKGTKVLTSLTSVLHDSKEFPNPEMFDPGHFLDENGNFKKSDYFLPFSAGKRACVGEGLARMQLFLFLTTILQNFN 457          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
CP26A_HUMAN4.043e-1831.95Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE... [more]
CP3AJ_CAPAE5.280e-1829.90Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP3AE_CAVPO5.280e-1829.61Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
CP2J5_MOUSE5.280e-1829.26Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2... [more]
CP3A1_RAT6.896e-1831.02Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1... [more]
CP2CF_RABIT9.006e-1832.02Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cun... [more]
CP3A6_RABIT1.176e-1732.20Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP2CP_MESAU1.176e-1732.58Cytochrome P450 2C25 OS=Mesocricetus auratus GN=CY... [more]
CP2CQ_MESAU1.536e-1732.02Cytochrome P450 2C26 OS=Mesocricetus auratus GN=CY... [more]
CP2C7_RAT1.536e-1731.28Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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