BQ623129

Overview
NameBQ623129
Unique NameBQ623129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8578 contig Csv1_Contig8578:57..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27
Identity = 68/167 (40.72%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            + DFCVADL    +  GYPC  P     D+F+FS  L   G+  +  N + VT   VA +P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I S  + N  Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   32 LQDFCVADLDSEVTLNGYPC-KPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSN 197          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27
Identity = 69/185 (37.30%), Postives = 101/185 (54.59%), Query Frame = 3
Query:    6 FVSSSSNAMVNDFCVADLKLSDSP-------AGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLV 539
            F  +S    + DFC+   K   SP          PC   + VT +DFVFSGL  AGN T     A  P     FP +N LG+S  R DL  G + P H HP A+E+  +V G + +GF+ S+ N VY K +++G++M++P+GL+HFQ+N G   A      NS NPG+Q     +F + ++ +L+
Sbjct:   21 FTLASDPDPIQDFCIP--KPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSN-NKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSGINEELL 201          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27
Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3
Query:   33 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 488
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGV 182          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27
Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3
Query:   33 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 488
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGV 182          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27
Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3
Query:   33 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 488
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGV 182          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.764e-27
Identity = 68/175 (38.86%), Postives = 98/175 (56.00%), Query Frame = 3
Query:    3 AFVSSSSNAMVNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN 518
            +FV     + + D+CVA  + +     G  C  P  VTA+DF  SGL V GNT++     +T   V + P +N LG+ +AR+D A GG+ P HTHP  SEI LV+ G +  GF+SS+    T++ K L  GD+ +FP+GL+ F  N G   A+   +  S NPG  I   A+F +
Sbjct:   20 SFVYCYEPSPLQDYCVATNETNGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGS 194          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.764e-27
Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS--ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            + D+CVA    +     G  C  P +VTA+DF +SGL + GNT++ + A+VT   V + P +N LG+++ARLD A GG +P H HP AS+I+LV+ G ++ GF+SS+    T++ K L  GD+  FP GL+ F  N+G   A+      S +PG+     A+F +N
Sbjct:   30 LQDYCVATNGTNRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSN 195          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.833e-27
Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFAN 518
            + DFCVAD+       G+PC  P  VT+DDF  +    +  NT + + + VT   V  FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD+ +FP+ ++HFQ+N   +  A+   + +S NPG+     A+F +
Sbjct:   29 LQDFCVADMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGS 192          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.507e-26
Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   32 LQDFCVADLNSEVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSN 197          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.968e-26
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFAN 518
            + DFCVAD+K      G+PC  P  V +DDF  +    +  +T + + + VT   V  FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD  +FP+ ++HFQ+N   +  A+   S NS NPG+     A+F +
Sbjct:   29 LQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGS 192          
The following BLAST results are available for this feature:
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL33_ORYSJ5.179e-2740.72Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH5.179e-2737.30Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL119_ARATH5.179e-2742.95Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL117_ARATH5.179e-2742.95Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH5.179e-2742.95Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL15_ARATH6.764e-2738.86Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL12_ARATH6.764e-2739.76Putative germin-like protein subfamily 1 member 2 ... [more]
GL83_ORYSJ8.833e-2738.41Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ1.507e-2639.52Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL84_ORYSJ1.968e-2639.02Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00220 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00220 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623129 ID=BQ623129; Name=BQ623129; organism=Citrus sinensis; type=EST; length=553bp
TTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTC
GCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCC
CGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCG
GAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCT
CAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCT
TGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAA
TCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCA
GCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCTT
TCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACGGAGCCC
TCGGTTTTGTTAGCTTCAACAGCCCGAATCCTGGACTCCAAATCACCGAT
TTCGCCTTATTTGCTAACAACTTGTCTTCCCAATTGGTGGAGCAGACCAC
TTT
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