BQ623146

Overview
NameBQ623146
Unique NameBQ623146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6855 contig Csv1_Contig6855:34..671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: L18A_LUPLU (Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.268e-24
Identity = 59/160 (36.88%), Postives = 98/160 (61.25%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLE-KEKGIFKALEAYALANPN 542
            MG+       +ST+ P KL+K      D ++PKV+ + +++VE++ G+GGPG+IKK   +      +  H++DA+D+ N  YNY+ I GEG     +++ +SYESK++  PDGGS   + +KF+ K   ++  E V+   + K  G+FKA+E Y LA+P+
Sbjct:    1 MGIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDE--SLEKISYESKILPGPDGGSIGKINVKFHTK--GDVLSETVRDQAKFKGLGLFKAIEGYVLAHPD 155          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: RNS1_PANGI (Ribonuclease 1 OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.163e-23
Identity = 64/158 (40.51%), Postives = 89/158 (56.33%), Query Frame = 3
Query:   69 GVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 536
            GV    V  TST+P +KL+   +L  D +LPK  PQ +K+ E+I GDGG G++K     E + +   K R+DA+DK+   Y Y+ I   GD  +  I+ +     +V TPDGGS  K+T +  +     A I EE +K   EK   IFKA+EAY LAN
Sbjct:    1 GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDGGVGTVKLVTLGEASQFNTMKQRIDAIDKDALTYTYSII--GGDILLDIIESIVNHFTIVPTPDGGSIVKNTTI--YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 154          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: L18B_LUPLU (Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.050e-23
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 542
            MGV        S +   KLFK      D ++PKV+ Q+ ++VE++ G+GGPG++KK     G    Y  H++DA+D+ +  YNY+ + G G     +++ +++ESK++  PDGGS   + +KF+ K G  + +   +    +  G+FKA+E Y LANPN
Sbjct:    1 MGVFAFEDEHPSAVAQAKLFKALTKDSDDIIPKVIEQI-QSVEIVEGNGGPGTVKKITASHGGHTSYVLHKIDAIDEASFEYNYSIVGGTGLDE--SLEKITFESKLLSGPDGGSIGKIKVKFHTK-GDVLSDAVREEAKARGTGLFKAVEGYVLANPN 155          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PR13_PETCR (Pathogenesis-related protein B OS=Petroselinum crispum GN=PCPR1-3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.995e-22
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 536
            MGV    V  TS++  EKLFK   L  DTLLP+VLP  +K+ E + GDGG G++K  +  + + +K  K +VDA+DK    Y+Y+ I  +GD  +  I+ ++     V   DGG      I F  K  A + EE +K   ++   IFKA+EAY +AN
Sbjct:    1 MGVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSII--DGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN 155          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PR11_PETCR (Pathogenesis-related protein A OS=Petroselinum crispum GN=PCPR1-1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.995e-22
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 536
            MGV    V  TS++  EKLFK   L  DTLLP+VLP  +K+ E + GDGG G++K  +  + + +K  K +VDA+DK    Y+Y+ I  +GD  +  I+ ++     V   DGG      I F  K  A + EE +K   ++   IFKA+EAY +AN
Sbjct:    1 MGVQKSEVETTSSVSAEKLFKGLCLDIDTLLPQVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSII--DGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN 155          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: ALL2_APIGR (Major allergen Api g 2 OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.995e-22
Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 536
            MGV    V   ST+  EK+++ F+L  DT+ PKVLPQ++K+VE++ GDGG G++K  +  E  ++   K +VD +DK    Y YT I   GD  +  ++ V  E  VV T DGG   K+T +  +  K  A + E+++K   EK    FKA+EAY LAN
Sbjct:    1 MGVQKTVVEAPSTVSAEKMYQGFLLDMDTVFPKVLPQLIKSVEILEGDGGVGTVKLVHLGEATEYTTMKQKVDVIDKAGLAYTYTTI--GGDILVDVLESVVNEFVVVPT-DGGCIVKNTTI--YNTKGDAVLPEDKIKEATEKSALAFKAVEAYLLAN 154          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.814e-22
Identity = 60/161 (37.27%), Postives = 94/161 (58.39%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 542
            MGV +     T+ + P +LFK  V+  D L+PK++PQV KN+E      G GSIKK NFVEG+  KY KH++  +D +N +  Y+ IEG+  GD     ++ +SY+ K     +GG     + +++ K    +K+E+   G ++   +FK +EAY LANP+
Sbjct:    1 MGVTSYTHETTTPIAPTRLFKALVVDSDNLIPKLMPQV-KNIEA----EGDGSIKKMNFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGD----KLESISYDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQGMELFKIVEAYLLANPS 152          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: RAP_TAROF (Root allergen protein OS=Taraxacum officinale PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.162e-21
Identity = 56/150 (37.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:   96 TSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            TS+L P  +FK FV+ FDT+ PK  P+  K+++ I GDGG G+IK   + +G  +   KH+VDA+D  N   +YT    EGD  +  I+  ++  K + + DGGS     + F  K  A++ +E V    E  K  FKA+E Y +++P A
Sbjct:    9 TSSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFTSSKHKVDAIDSNNFSISYTIF--EGDVLMGIIESGTHHLKFLPSADGGSVYKHSMVFKCKGDAKLTDENVSLMKEGLKKTFKAIETYVISHPEA 156          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PRS1_SOLTU (Pathogenesis-related protein STH-21 OS=Solanum tuberosum GN=STH-21 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.589e-21
Identity = 59/161 (36.65%), Postives = 93/161 (57.76%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 542
            MGV +  +  T+ + P +LFK  V+  D L+PK++PQV KN+E      G GSIKK  FVEG+  KY KH++  +D +N +  Y+ IEG+  GD     ++ +SY+ K     +GG     + +++ K    +K+E    G ++   +FK +EAY LANP+
Sbjct:    1 MGVTSYTLETTTPVAPTRLFKALVVDSDNLIPKLMPQV-KNIEA----EGDGSIKKMTFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGD----KLESISYDLKFEAHGNGGCVCKSIAEYHTKGDYVLKDEDHNEGKKQGMELFKIVEAYLLANPS 152          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: ABR17_PEA (ABA-responsive protein ABR17 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.382e-21
Identity = 55/158 (34.81%), Postives = 90/158 (56.96%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANP 539
            MGV   +    ST+ P KL+K      D ++PKV+ +  + VE+I G+GGPG+IKK + +E     Y  H++DA+D+ N  YNY+ + G G     +++ V++E+ ++   DGGS   + +K++ K  A + +        K  G+ KA+E Y LANP
Sbjct:    1 MGVFVFDDEYVSTVAPPKLYKALAKDADEIVPKVIKEA-QGVEIIEGNGGPGTIKKLSILEDGKTNYVLHKLDAVDEANFGYNYSLVGGPGLHE--SLEKVAFETIILAGSDGGSIVKISVKYHTKGDAALSDAVRDETKAKGTGLIKAIEGYVLANP 155          
The following BLAST results are available for this feature:
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
L18A_LUPLU3.268e-2436.88Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV... [more]
RNS1_PANGI6.163e-2340.51Ribonuclease 1 OS=Panax ginseng PE=1 SV=1[more]
L18B_LUPLU8.050e-2335.22Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV... [more]
PR13_PETCR3.995e-2238.85Pathogenesis-related protein B OS=Petroselinum cri... [more]
PR11_PETCR3.995e-2238.85Pathogenesis-related protein A OS=Petroselinum cri... [more]
ALL2_APIGR3.995e-2240.25Major allergen Api g 2 OS=Apium graveolens PE=1 SV... [more]
PRS2_SOLTU6.814e-2237.27Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
RAP_TAROF1.162e-2137.33Root allergen protein OS=Taraxacum officinale PE=1... [more]
PRS1_SOLTU2.589e-2136.65Pathogenesis-related protein STH-21 OS=Solanum tub... [more]
ABR17_PEA3.382e-2134.81ABA-responsive protein ABR17 OS=Pisum sativum PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00237 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00237 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623146 ID=BQ623146; Name=BQ623146; organism=Citrus sinensis; type=EST; length=638bp
AAATTTCCCAATTTTAGTTGATCGGTAGTTTTCATCTTCTTTCTTTGTTT
AACTCTTAGACAATCATGGGTGTTCTCACGTTGAATGTATAGGATACAAG
CACTCTCCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCAGTTCGACA
CCCTTCTGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAATTGATT
TCAGGGGATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTTGAAGG
TGCTGATTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGA
ACAAGATATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATC
CCTACTATTGATCATGTTTCTTATGAGAGTAAGGTTGTGGGCACCCCTGA
CGGAGGAAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTG
CCGAGATTAAGGAAGAGCAGGTTAAGGGAGGCTTGGAAAAGGAGAAGGGA
ATTTTTAAGGCTCTGGAAGCCTATGCCTTGGCAAACCCCAATGCCGTATA
AGCTCTTACGTCAACACTTCACCGCACTTGCGTCGCCTTTGTTGCAACAT
TATGAATAATCATGTTTATGGCTTCCGTATGTCGTGTC
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