BQ623147

Overview
NameBQ623147
Unique NameBQ623147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:897..1543. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.005e-63
Identity = 109/150 (72.67%), Postives = 129/150 (86.00%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            L EA PGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+ NFT+QVI+MNHPGQI  GY PVLDCHT+HIA KF+EL  K+DRR+GK  E  PKFLK+GDAG+V++IPTKP  VE+F+DY PLGRFAVRDMRQTVAVGVIKSV K D +G
Sbjct:  300 LPEASPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKNFTAQVIVMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRTGKSTEASPKFLKSGDAGIVELIPTKPPCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVTKDDGSG 449          

HSP 2 Score: 36.1946 bits (82), Expect = 1.005e-63
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P  +TTEVKSVEMHH S+
Sbjct:  280 TFAPQNVTTEVKSVEMHHESL 300          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A1_OSCTI (Elongation factor 1-alpha 1 OS=Oscheius tipulae GN=eft-1 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.005e-63
Identity = 108/150 (72.00%), Postives = 131/150 (87.33%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            L EA PGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D +G
Sbjct:  299 LPEAQPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDDGSG 448          

HSP 2 Score: 36.1946 bits (82), Expect = 1.005e-63
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P  +TTEVKSVEMHH S+
Sbjct:  279 TFAPQNVTTEVKSVEMHHESL 299          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.311e-63
Identity = 108/150 (72.00%), Postives = 128/150 (85.33%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            L +A PGDNVGFNVKNV+VKDLKRG+V  +SK+DP +  A+F +QVII+NHPG+I  GYAPVLDCHT+HIA KFSEL+ K+DRRSGK+LE  PK +K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSVEKK+  G
Sbjct:  291 LTQAGPGDNVGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDSPKMIKSGDAAMVKMVASKPMCVEAFTSYPPLGRFAVRDMRQTVAVGVIKSVEKKEVEG 440          

HSP 2 Score: 38.5058 bits (88), Expect = 1.311e-63
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF PSGL+TEVKSVEMHH ++
Sbjct:  271 TFAPSGLSTEVKSVEMHHEAL 291          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.710e-63
Identity = 108/150 (72.00%), Postives = 128/150 (85.33%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            L +A PGDNVGFNVKNV+VKDLKRG+V  +SK+DP +  A+F +QVII+NHPG+I  GYAPVLDCHT+HIA KFSEL+ K+DRRSGK+LE  PK +K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSVEKK+  G
Sbjct:  291 LPQAGPGDNVGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDTPKMIKSGDAAMVKMVASKPMCVEAFTQYPPLGRFAVRDMRQTVAVGVIKSVEKKEVEG 440          

HSP 2 Score: 38.5058 bits (88), Expect = 1.710e-63
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF PSGL+TEVKSVEMHH ++
Sbjct:  271 TFAPSGLSTEVKSVEMHHEAL 291          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A1_HORSE (Elongation factor 1-alpha 1 OS=Equus caballus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.229e-63
Identity = 112/146 (76.71%), Postives = 128/146 (87.67%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 502
            L EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPV DCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  299 LSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVPDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          

HSP 2 Score: 34.2686 bits (77), Expect = 2.229e-63
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P  +TTEVKSVEMHH ++
Sbjct:  279 TFAPVNVTTEVKSVEMHHEAL 299          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_COCIM (Elongation factor 1-alpha OS=Coccidioides immitis GN=TEF PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 2.229e-63
Identity = 105/152 (69.08%), Postives = 131/152 (86.18%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            ++L +  PGDNVGFNVKNV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK + TG
Sbjct:  296 QQLTQGNPGDNVGFNVKNVSVKEVRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSEKTG 447          

HSP 2 Score: 36.5798 bits (83), Expect = 2.229e-63
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF PS +TTEVKSVEMHH+ +
Sbjct:  278 TFAPSNVTTEVKSVEMHHQQL 298          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 2.906e-63
Identity = 105/147 (71.43%), Postives = 131/147 (89.12%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 499
            ++L + +PGDNVGFNVKNV+VKD++RG VA +SK+DP   AA+FT+QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E  PKF+K+GDA +VKMIP+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+V+K
Sbjct:  296 EQLAQGVPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPAGAASFTAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKAVEASPKFIKSGDAAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVDK 442          

HSP 2 Score: 36.5798 bits (83), Expect = 2.906e-63
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSVCR 71
            TF PS +TTEVKSVEMHH  + +
Sbjct:  278 TFAPSNVTTEVKSVEMHHEQLAQ 300          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 3.789e-63
Identity = 104/149 (69.80%), Postives = 130/149 (87.25%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPT 511
            L++A PGDNVGFNVKNV+VK+L+RG+VAS+SK++PAR + +F +QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E EPKF+K+GDA M+ ++P+KP+ VE FSD+PPLGRFAVRDMRQTVAVGVIKSV  KDPT
Sbjct:  299 LEQASPGDNVGFNVKNVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEAEPKFIKSGDAAMITLVPSKPLCVEAFSDFPPLGRFAVRDMRQTVAVGVIKSVNFKDPT 447          

HSP 2 Score: 36.965 bits (84), Expect = 3.789e-63
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+ +TTEVKSVEMHH S+
Sbjct:  279 TFAPANITTEVKSVEMHHESL 299          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_CANAL (Elongation factor 1-alpha OS=Candida albicans GN=TEF1 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.789e-63
Identity = 105/152 (69.08%), Postives = 129/152 (84.87%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            ++L E +PGDNVGFNVKNV+VK+++RG V  +SK+DP +   +F +QVI++NHPGQI  GY+PVLDCHT+HIA KF  LV KIDRR+GK+LE+ PKF+K+GDA +VKM+PTKPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D  G
Sbjct:  295 EQLAEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446          

HSP 2 Score: 37.3502 bits (85), Expect = 3.789e-63
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+G+TTEVKSVEMHH  +
Sbjct:  277 TFAPAGVTTEVKSVEMHHEQL 297          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.941e-63
Identity = 110/146 (75.34%), Postives = 127/146 (86.99%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 502
            L EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  299 LSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          

HSP 2 Score: 34.6538 bits (78), Expect = 4.941e-63
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P  +TTEVKSVEMHH ++
Sbjct:  279 TFAPVNITTEVKSVEMHHEAL 299          
The following BLAST results are available for this feature:
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A3_OSCTI1.005e-6372.67Elongation factor 1-alpha 3 OS=Oscheius tipulae GN... [more]
EF1A1_OSCTI1.005e-6372.00Elongation factor 1-alpha 1 OS=Oscheius tipulae GN... [more]
EF1AC_PORPU1.311e-6372.00Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A_PORYE1.710e-6372.00Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A1_HORSE2.229e-6376.71Elongation factor 1-alpha 1 OS=Equus caballus GN=E... [more]
EF1A_COCIM2.229e-6369.08Elongation factor 1-alpha OS=Coccidioides immitis ... [more]
EF1A_NEUCR2.906e-6371.43Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A_ARTSA3.789e-6369.80Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]
EF1A_CANAL3.789e-6369.08Elongation factor 1-alpha OS=Candida albicans GN=T... [more]
EF1A2_RABIT4.941e-6375.34Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00238 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623147 ID=BQ623147; Name=BQ623147; organism=Citrus sinensis; type=EST; length=649bp
TGACATTTGGTCCCTCTGGATTGACAACTGAGGTTAAGTCTGTTGAGATG
CACCATCGAAGCGTCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTC
AACGTGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTC
CAACTCGAAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGG
TCATCATCATGAACCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTG
CTTGACTGCCACACCTCCCACATTGCCGTCAAGTTTTCTGAGCTCGTGAC
GAAGATTGATAGGCGATCAGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCT
TGAAGAATGGAGATGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATG
GTTGTTGAGACATTCTCCGACTACCCACCCCTTGGTCGTTTTGCTGTTAG
GGACATGCGTCAGACTGTTGCTGTGGGTGTTATCAAGAGTGTTGAGAAGA
AGGATCCCACAGGTGCCAAGGTCACCAAGTCCGCAGCCAAGAAGAAATGA
GAAATTTTTATGGGTCTGTCTACAATAGTTAGGGGTTATTTTCTGTCTTT
TTTATTTTCTTTTCTGGTTTTGGTTTGCATCAATGTTTCTGCAAACAGA
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