BQ623151

Overview
NameBQ623151
Unique NameBQ623151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:1116..1722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623151 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 37/119 (31.09%), Postives = 53/119 (44.54%), Query Frame = 1 
Query:    1 LQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 357
            L  VIKET RL    PLLVP   + + K+ GY +  ++++ VN W +  +P  WK                ++  G D+  LPFG GRR CP               L+ +F+   P G
Sbjct:  355 LNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWK--DPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEG 471
The following BLAST results are available for this feature:
BLAST of BQ623151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
C71BA_ARATH6.459e-1131.09Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00242 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00242 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623151 ID=BQ623151; Name=BQ623151; organism=Citrus sinensis; type=EST; length=608bp
CTTCAGGCCGTGATCAAGGAAACTCTTCGCCTTAGGATGGCAATTCCTCT
TCTTGTCCCGCACATGAACCTTCACGACGCCAAGCTTGGAGGCTACGACG
TCCCTGCTGAGAGCAAAATCCTAGTGAACGCGTGGTGGCTCGCCAACAAT
CCCGCCCAATGGAAGAAACCTGAAGAATTCAGGCCTGAGAGGTTTTTGGA
GGAGGAGTCCAAGGTTGAGGCTAATGGAAATGACTTCCGTTACCTTCCTT
TCGGTGTTGGAAGAAGAAGCTGCCCTGGAATTATCCTTGCTTTGCCAATT
CTTGGTATCACTATTGGGCGTTTGGTACAGAACTTTGAGCTCTTGCCTCC
TCCAGGTCAATCTAAGATTGACACTGCAGAGAAAGGTGGGCAGTTCAGTT
TGCACATTTTGAAGCACTCGACCATTGTTGCCAAGCCTAGATCATTCTAG
TTTCACAATTCCATTTGGTTGTAATGTTAAAGACTGTTTCAAAGTGGTTG
AATGGTTTCTTCAATGTCGGATCAAATCAAGTGGCAGTTGGCTAGTTATG
TAATACTTGTGTAAATTTGTGAACTTAAATCTTCAAATCTTCATTTAGAT
TTGCAATA
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