BQ623160

Overview
NameBQ623160
Unique NameBQ623160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALTI (S-adenosylmethionine synthetase OS=Salmonella typhi GN=metK PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALSV (S-adenosylmethionine synthetase OS=Salmonella schwarzengrund (strain CVM19633) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALPK (S-adenosylmethionine synthetase OS=Salmonella paratyphi A (strain AKU_12601) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALPA (S-adenosylmethionine synthetase OS=Salmonella paratyphi A GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALNS (S-adenosylmethionine synthetase OS=Salmonella newport (strain SL254) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALG2 (S-adenosylmethionine synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALEP (S-adenosylmethionine synthetase OS=Salmonella enteritidis PT4 (strain P125109) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALCH (S-adenosylmethionine synthetase OS=Salmonella choleraesuis GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALA4 (S-adenosylmethionine synthetase OS=Salmonella agona (strain SL483) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_PROMP (S-adenosylmethionine synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 64/123 (52.03%), Postives = 84/123 (68.29%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDL----KRGGNGRFLKTAAYGHFGRDDPDFTWEVVK 359
            GGGAFSGKDPTKVDRS AY  R  AKSIV   LA++  VQ+SYAIGV +P+S+ V+++GTG I    + +++K +FD RP  +    DL    K+ G   F KTA+YGHFGR+D +  WE V+
Sbjct:  277 GGGAFSGKDPTKVDRSAAYAARYVAKSIVKAKLAKKAEVQLSYAIGVAKPISILVETFGTGIISQDNLKELIKNNFDLRPAAIIKEFDLRNLPKKMGGEFFRKTASYGHFGRNDLNLPWERVE 399
The following BLAST results are available for this feature:
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SALTI1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella typh... [more]
METK_SALSV1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella schw... [more]
METK_SALPK1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALPA1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALNS1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella newp... [more]
METK_SALG21.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella gall... [more]
METK_SALEP1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella ente... [more]
METK_SALCH1.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella chol... [more]
METK_SALA41.094e-2856.03S-adenosylmethionine synthetase OS=Salmonella agon... [more]
METK_PROMP1.094e-2852.03S-adenosylmethionine synthetase OS=Prochlorococcus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00251 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00251 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623160 ID=BQ623160; Name=BQ623160; organism=Citrus sinensis; type=EST; length=590bp
GGGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGT
GGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCT
TGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGC
CATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAG
GAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGAT
GACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGA
CTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAA
GTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGA
AAAGTGAAAACTATCCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTGT
CTTCTTTTCCCCACTTCTTTTTTGGGTTTGGGTTAAATGT
back to top