BQ623160

Overview
NameBQ623160
Unique NameBQ623160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ V+++GTGK+ D+ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVADELLVALVREHFDLRPYGLIKMLDLIK---PIYRETAAYGHFGRE--QFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 63/116 (54.31%), Postives = 85/116 (73.28%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS +Y  R  AK+IVA GLA +  VQ+SYAIGV +P+SV V+++G+GK+P+++++  +++ FD RP  +   LDL+R     + KTAAYGHFGR D D  WE
Sbjct:  270 GGGAFSGKDATKVDRSASYAARYIAKNIVAAGLASQVEVQISYAIGVAQPVSVSVNTFGSGKVPNQKLVDAIRKVFDLRPAGIIKMLDLRR---PIYKKTAAYGHFGRTDIDLPWE 382          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS +Y  R  AK+IVA GLA RC VQ++YAIGV  P+S+ +D+ GTGK+ D  + + V+  FD RP  +   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  271 GGGAFSGKDSTKVDRSASYAARYVAKNIVAAGLAYRCEVQLAYAIGVAHPVSIMIDTAGTGKVDDDLLTEAVRHVFDLRPAGIIKMLDLRR---PIYEQTAAYGHFGRTDVDLSWE 383          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_HYPNA (S-adenosylmethionine synthetase OS=Hyphomonas neptunium (strain ATCC 15444) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR---DDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +PLS++VD++GTG+  +  I K V+E FD  P  +  +L L    N  +  TAAYGHFGR   +   FTWE
Sbjct:  265 GGGAFSGKDPSKVDRSAAYATRYLAKNIVAAGLATRCTIQVSYAIGVAQPLSIYVDTHGTGQADEARIAKAVRELFDLSPKGIRTHLKL---SNPIYGPTAAYGHFGRIPGEGGTFTWE 380          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 64/116 (55.17%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTKVDRS +Y  R  AK+IVA GLA RC V V+YAIGV +P+++ VD++GTG I ++ + K+V E FD RP  +  +LDL+R     + + AAYGHFGR D +  WE
Sbjct:  268 GGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLASRCEVHVAYAIGVAKPVALRVDTFGTGLINEERLEKLVLEHFDLRPAAIIHHLDLRR---PIYRQVAAYGHFGRGDLNLPWE 380          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_BIFA0 (S-adenosylmethionine synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGT--GKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA +  VQV+YAIGV EP+S+ V++YGT    +  ++I + V++ FD RP  +   LDL R     + KTAAYGHFGR+D DFTWE
Sbjct:  277 GGGAFSGKDPSKVDRSAAYAARWVAKNIVAAGLAHKVEVQVAYAIGVAEPVSINVETYGTEADGVTREQIQEAVRKVFDLRPAAIVDELDLLR---PIYSKTAAYGHFGREDDDFTWE 391          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_ALCBS (S-adenosylmethionine synthetase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=metK PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28
Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ V+++GTGKI D  I+ +V+E FD RP  +   LDL++     +  TA+YGHFGR+   F+WE
Sbjct:  260 GGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASKCEIQVSYAIGVAEPTSISVNTFGTGKISDSAIVDLVREHFDLRPRGIIEMLDLRK---PIYRPTASYGHFGRE--GFSWE 370          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_WOLSU (S-adenosylmethionine synthetase OS=Wolinella succinogenes GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 60/116 (51.72%), Postives = 85/116 (73.28%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRSGAY  R  AK++VA+G+  +  +Q++YAIGV EP+S+ VD++GTGK+ D ++   V++ F   P  +  +LDL R     + KTA+YGHFGR+ P+F+WE
Sbjct:  259 GGGAFSGKDPSKVDRSGAYAARYVAKNLVASGVCDKATIQIAYAIGVVEPVSILVDTHGTGKVEDDQLETCVRQLFRLTPKGIIESLDLLR---PIYKKTASYGHFGRELPEFSWE 371          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_STRM5 (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW 347
            GGGAFSGKDP+KVDRS AY  R  AK++VA GLA RC VQVSYAIGV EP S+ V ++GTGKI D +I K++++ FD RP  +   LDL    +  + +TAAYGHFGR   +F++
Sbjct:  261 GGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLV---HPMYQQTAAYGHFGRKPKEFSY 372          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SALHS (S-adenosylmethionine synthetase OS=Salmonella heidelberg (strain SL476) GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPVEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
The following BLAST results are available for this feature:
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MANSM1.094e-2856.03S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_LACS11.094e-2854.31S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_LACH41.094e-2855.17S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_HYPNA1.094e-2856.30S-adenosylmethionine synthetase OS=Hyphomonas nept... [more]
METK_DESAP1.094e-2855.17S-adenosylmethionine synthetase OS=Desulforudis au... [more]
METK_BIFA01.094e-2856.78S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_ALCBS1.094e-2856.90S-adenosylmethionine synthetase OS=Alcanivorax bor... [more]
METK_WOLSU1.429e-2851.72S-adenosylmethionine synthetase OS=Wolinella succi... [more]
METK_STRM51.429e-2856.52S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_SALHS1.429e-2856.03S-adenosylmethionine synthetase OS=Salmonella heid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00251 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00251 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623160 ID=BQ623160; Name=BQ623160; organism=Citrus sinensis; type=EST; length=590bp
GGGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGT
GGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCT
TGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGC
CATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAG
GAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGAT
GACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGA
CTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAA
GTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGA
AAAGTGAAAACTATCCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTGT
CTTCTTTTCCCCACTTCTTTTTTGGGTTTGGGTTAAATGT
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