BQ623160

Overview
NameBQ623160
Unique NameBQ623160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_PROMA (S-adenosylmethionine synthetase OS=Prochlorococcus marinus GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGN---GRFLK-TAAYGHFGRDDPDFTWEVVK 359
            GGGAFSGKDPTKVDRS AY  R  AKS+VA GLA R  VQ+SYAIGV  P+S+ V+++G+GK+ ++ + ++V E+FD RPG +     L+   N   GRF +  AAYGHFGR D +  WE V+
Sbjct:  277 GGGAFSGKDPTKVDRSAAYAARFVAKSLVAAGLASRVEVQLSYAIGVANPVSILVEAFGSGKMSNEALTELVTENFDLRPGAIIEQFGLRSLPNQRQGRFYRDVAAYGHFGRPDLNLPWEDVQ 399          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_NOSP7 (S-adenosylmethionine synthetase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 65/120 (54.17%), Postives = 84/120 (70.00%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPG--MMTINL-DLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTKVDRS AY  R  AK+IVA GLA +  +Q+SYAIGV  P S+ VD++GTGK+ ++ +L+++ + F+ RP   + T NL +L     GRF +  AAYGHFGR D D  WE
Sbjct:  280 GGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAEKVEIQLSYAIGVARPTSILVDTFGTGKVDEETLLELINQHFELRPAGIIHTFNLRNLPSERGGRFYQDVAAYGHFGRADLDLPWE 399          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 67/127 (52.76%), Postives = 86/127 (67.72%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 377
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV +P S+ ++++GTGKI D +I+ +V+  FD RP  +T  LDL    +  +  TAAYGHFGRD  + T   +      WEK
Sbjct:  260 GGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAEKCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIDLVRAHFDLRPYAITNMLDLL---HPMYRATAAYGHFGRDPYEMTVGGKTFTAFPWEK 383          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_FINM2 (S-adenosylmethionine synthetase OS=Finegoldia magna (strain ATCC 29328) GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 60/116 (51.72%), Postives = 84/116 (72.41%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTK DRS AY  R  AK++VA GL  +C V  SYAIGV +P+S+F++++GT KI +++I++ + E+FD RP  +   LDL+R     + + A+YGHFGR+D D +WE
Sbjct:  268 GGGAFSGKDPTKTDRSAAYFARYIAKNVVAAGLCDKCEVGFSYAIGVAKPISMFINTFGTNKIEEEKIIQAINENFDARPKAIIDKLDLQR---PIYREVASYGHFGRNDLDLSWE 380          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28
Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRSGAY  R  AK+IVA GLA +C VQ++YAIGV +P+S+ V+++GTGK  +  ++++V++ FD RP  +   LDL+R     + +TAAYGHFGR D    WE
Sbjct:  275 GGGAFSGKDATKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAQPVSIAVNTFGTGKAAEDVLVELVRKHFDLRPAGIIRMLDLRR---PIYKQTAAYGHFGRTDVPLPWE 387          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_STRMK (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW 347
            GGGAFSGKDP+KVDRS AY  R  AK++VA GLA RC VQVSYAIGV EP S+ V ++GTGKI D +I K++++ FD RP  +   LDL    +  + +TAAYGHFGR   +F++
Sbjct:  261 GGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLI---HPMYQQTAAYGHFGRKPKEFSY 372          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 64/116 (55.17%), Postives = 85/116 (73.28%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA+RC +Q+SYAIGV EP S+ V+++GTG++ D+ +  +V+E F+ RP  +   LDL+R     +  TAAYGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAKRCEIQISYAIGVAEPTSINVETFGTGQVSDEVLTTLVREHFELRPYGLIKMLDLER---PIYQATAAYGHFGRE--EFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_OCEIH (S-adenosylmethionine synthetase OS=Oceanobacillus iheyensis GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS AY  R  AK+IVA GLA+ C VQ++YAIGV +P+S+ V+++GTGK+ +  +++ V+E FD RP  +   LDL++     +  TAAYGHFGR D  F WE
Sbjct:  273 GGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAKSCEVQLAYAIGVAQPVSIAVNTFGTGKVSEDRLVEAVRELFDLRPAGIIRMLDLRK---PIYKNTAAYGHFGRKDILFPWE 385          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_NITHX (S-adenosylmethionine synthetase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR---DDPDFTWE 350
            GGGAFSGKDPTKVDRS AY  R  AK+IVA GLA RC +Q++YAIGV  PLS+++D++GTGK P+  + +IV E+ D  P  +  +LDL R     + +T++YGHFGR   ++  F+WE
Sbjct:  271 GGGAFSGKDPTKVDRSAAYAARYLAKNIVAAGLADRCTLQLAYAIGVARPLSIYIDTHGTGKAPEDTLERIVSEAMDLTPRGIRKHLDLNR---PIYARTSSYGHFGRTPDNEGGFSWE 386          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTKVDRSGAY  R  AK+IVA GLA++  VQV+YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  273 GGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
The following BLAST results are available for this feature:
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROMA1.429e-2853.66S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_NOSP71.429e-2854.17S-adenosylmethionine synthetase OS=Nostoc punctifo... [more]
METK_MARAV1.429e-2852.76S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_FINM21.429e-2851.72S-adenosylmethionine synthetase OS=Finegoldia magn... [more]
METK_BACSK1.429e-2854.31S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_STRMK1.867e-2856.52S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_PSEA61.867e-2855.17S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_OCEIH1.867e-2854.31S-adenosylmethionine synthetase OS=Oceanobacillus ... [more]
METK_NITHX1.867e-2852.94S-adenosylmethionine synthetase OS=Nitrobacter ham... [more]
METK_LISMO1.867e-2855.17S-adenosylmethionine synthetase OS=Listeria monocy... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00251 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00251 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623160 ID=BQ623160; Name=BQ623160; organism=Citrus sinensis; type=EST; length=590bp
GGGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGT
GGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCT
TGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGC
CATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAG
GAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGAT
GACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGA
CTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAA
GTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGA
AAAGTGAAAACTATCCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTGT
CTTCTTTTCCCCACTTCTTTTTTGGGTTTGGGTTAAATGT
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